RNA–Protein interactions for RNA: ENST00000607102.1

CNN2-212, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-212ENST00000607102 LCLAT1Q6UWP7 414 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 C4orf50Q6ZRC1 276 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 H2AFVQ71UI9 128 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 TMCO2Q7Z6W1 182 aaPredicted RBP17.12■□□□□ 0.33
CNN2-212ENST00000607102 OSTM1Q86WC4 334 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 GPR65Q8IYL9 337 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 LNX1Q8TBB1 728 aaPredicted RBP17.12■□□□□ 0.33
CNN2-212ENST00000607102 CLP1Q92989 425 aaKnown RBP17.12■□□□□ 0.33
CNN2-212ENST00000607102 CYFIP2Q96F07 1278 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 SAMD11Q96NU1 681 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 DESI2Q9BSY9 194 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 PLVAPQ9BX97 442 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 TIMM13Q9Y5L4 95 aaPredicted RBP17.12■□□□□ 0.33
CNN2-212ENST00000607102 NT5C1B-RDH14C9J2C7 533 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 M0QYV0 167 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 SOD2P04179 222 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 CYP1A1P04798 512 aaPredicted RBP17.11■□□□□ 0.33
CNN2-212ENST00000607102 MYBL1P10243 752 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 LMO2P25791 158 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 CENPCQ03188 943 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 NFE2Q16621 373 aaPredicted RBP17.11■□□□□ 0.33
CNN2-212ENST00000607102 CTXN3Q4LDR2 81 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 INTS6LQ5JSJ4 861 aaKnown RBP17.11■□□□□ 0.33
CNN2-212ENST00000607102 VARS2Q5ST30 1063 aaKnown RBP17.11■□□□□ 0.33
CNN2-212ENST00000607102 ACAD10Q6JQN1 1059 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 ZNF662Q6ZS27 426 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 DDX53Q86TM3 631 aaKnown RBP17.11■□□□□ 0.33
CNN2-212ENST00000607102 CEP57Q86XR8 500 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 ACRBPQ8NEB7 543 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 MYCBPAPQ8TBZ2 947 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 CTNNBL1Q8WYA6 563 aaPredicted RBP17.11■□□□□ 0.33
CNN2-212ENST00000607102 VCPIP1Q96JH7 1222 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 CALR3Q96L12 384 aaKnown RBP17.11■□□□□ 0.33
CNN2-212ENST00000607102 HNRNPABQ99729 332 aaKnown RBP17.11■□□□□ 0.33
CNN2-212ENST00000607102 MED10Q9BTT4 135 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 HERC2P3Q9BVR0 1158 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 GPR62Q9BZJ7 368 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 ACP6Q9NPH0 428 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 HCSTQ9UBK5 93 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 TSPAN16Q9UKR8 245 aa17.11■□□□□ 0.33
CNN2-212ENST00000607102 ANKRD62A6NC57 917 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 F8W810 466 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 MICAL2O94851 1124 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 CALB1P05937 261 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 URODP06132 367 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 CDH5P33151 784 aaPredicted RBP17.1■□□□□ 0.33
CNN2-212ENST00000607102 NOMO3P69849 1222 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 PLCB3Q01970 1234 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 CYP27A1Q02318 531 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 ORC1Q13415 861 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 IFI16Q16666 785 aaKnown RBP17.1■□□□□ 0.33
CNN2-212ENST00000607102 GOLGA7BQ2TAP0 167 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 MDH1BQ5I0G3 518 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 LIN9Q5TKA1 542 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 CCAR2Q8N163 923 aaKnown RBP17.1■□□□□ 0.33
CNN2-212ENST00000607102 IPO4Q8TEX9 1081 aaKnown RBP17.1■□□□□ 0.33
CNN2-212ENST00000607102 TFAP2BQ92481 460 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 ISCUQ9H1K1 167 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 DPEP3Q9H4B8 488 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 FAM49BQ9NUQ9 324 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 STRIP2Q9ULQ0 834 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 PCDHA11Q9Y5I1 949 aa17.1■□□□□ 0.33
CNN2-212ENST00000607102 ESPNB1AK53 854 aa17.09■□□□□ 0.33
CNN2-212ENST00000607102 FTLP02792 175 aaPredicted RBP17.09■□□□□ 0.33
CNN2-212ENST00000607102 TMEM253P0C7T8 217 aa17.09■□□□□ 0.33
CNN2-212ENST00000607102 FAM200BP0CF97 657 aa17.09■□□□□ 0.33
CNN2-212ENST00000607102 UNGP13051 313 aaPredicted RBP17.09■□□□□ 0.33
CNN2-212ENST00000607102 ACAT1P24752 427 aaKnown RBP17.09■□□□□ 0.33
CNN2-212ENST00000607102 PBX3P40426 434 aa17.09■□□□□ 0.33
CNN2-212ENST00000607102 GLUD2P49448 558 aa17.09■□□□□ 0.33
CNN2-212ENST00000607102 PSMC1P62191 440 aaKnown RBP17.09■□□□□ 0.33
CNN2-212ENST00000607102 C1QBPQ07021 282 aaKnown RBP17.09■□□□□ 0.33
CNN2-212ENST00000607102 BST2Q10589 180 aaKnown RBP17.09■□□□□ 0.33
CNN2-212ENST00000607102 MRPL58Q14197 206 aaKnown RBP17.09■□□□□ 0.33
CNN2-212ENST00000607102 PPP1R26Q5T8A7 1209 aaPredicted RBP17.09■□□□□ 0.33
CNN2-212ENST00000607102 NAA35Q5VZE5 725 aa17.09■□□□□ 0.33
CNN2-212ENST00000607102 ANKRD52Q8NB46 1076 aa17.09■□□□□ 0.33
CNN2-212ENST00000607102 C2orf15Q8WU43 125 aaKnown RBP17.09■□□□□ 0.33
CNN2-212ENST00000607102 PIK3R5Q8WYR1 880 aa17.09■□□□□ 0.33
CNN2-212ENST00000607102 SYNCQ9H7C4 482 aa17.09■□□□□ 0.33
CNN2-212ENST00000607102 CYLDQ9NQC7 956 aa17.09■□□□□ 0.33
CNN2-212ENST00000607102 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.09■□□□□ 0.33
CNN2-212ENST00000607102 NENFQ9UMX5 172 aa17.09■□□□□ 0.33
CNN2-212ENST00000607102 BACE2Q9Y5Z0 518 aa17.09■□□□□ 0.33
CNN2-212ENST00000607102 MKI67P46013 3256 aaKnown RBP17.09■□□□□ 0.33
CNN2-212ENST00000607102 TMCO5BA8MYB1 307 aa17.08■□□□□ 0.32
CNN2-212ENST00000607102 TUBB4AP04350 444 aa17.08■□□□□ 0.32
CNN2-212ENST00000607102 RB1P06400 928 aa17.08■□□□□ 0.32
CNN2-212ENST00000607102 IGFBP6P24592 240 aaPredicted RBP17.08■□□□□ 0.32
CNN2-212ENST00000607102 CTNNB1P35222 781 aa17.08■□□□□ 0.32
CNN2-212ENST00000607102 ACADSBP45954 432 aa17.08■□□□□ 0.32
CNN2-212ENST00000607102 UBE3AQ05086 875 aa17.08■□□□□ 0.32
CNN2-212ENST00000607102 SHHQ15465 462 aa17.08■□□□□ 0.32
CNN2-212ENST00000607102 RAB30Q15771 203 aa17.08■□□□□ 0.32
CNN2-212ENST00000607102 FAM171BQ6P995 826 aa17.08■□□□□ 0.32
CNN2-212ENST00000607102 ERICH1Q86X53 443 aa17.08■□□□□ 0.32
CNN2-212ENST00000607102 PHF13Q86YI8 300 aaPredicted RBP17.08■□□□□ 0.32
CNN2-212ENST00000607102 SPATA2LQ8IUW3 424 aaPredicted RBP17.08■□□□□ 0.32
CNN2-212ENST00000607102 PASD1Q8IV76 773 aa17.08■□□□□ 0.32
CNN2-212ENST00000607102 RNF168Q8IYW5 571 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms