RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 GOLGA8JA6NMD2 632 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 HEPACAM2A8MVW5 462 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 CHADO15335 359 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 SOAT2O75908 522 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 SMC2O95347 1197 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 ITGB3P05106 788 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 ATF6P18850 670 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 POLR2BP30876 1174 aaKnown RBP14.35□□□□□ -0.11
CTSA-213ENST00000606782 GDI1P31150 447 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 RBP5P82980 135 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 SKOR2Q2VWA4 1001 aaPredicted RBP14.35□□□□□ -0.11
CTSA-213ENST00000606782 LIMS2Q7Z4I7 341 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 ARID3BQ8IVW6 561 aaPredicted RBP14.35□□□□□ -0.11
CTSA-213ENST00000606782 PDCL2Q8N4E4 241 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 GLIS3Q8NEA6 775 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 NELL1Q92832 810 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 ERCC4Q92889 916 aaPredicted RBP14.35□□□□□ -0.11
CTSA-213ENST00000606782 RSPRY1Q96DX4 576 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 ACBD6Q9BR61 282 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 KIAA1586Q9HCI6 787 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 PDE11AQ9HCR9 933 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 INTS13Q9NVM9 706 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 KIAA1468Q9P260 1216 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 SIX4Q9UIU6 781 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 ZMYM5Q9UJ78 669 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 L1RE1Q9UN81 338 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 CFAP54Q96N23 3096 aa14.35□□□□□ -0.11
CTSA-213ENST00000606782 ZNF233A6NK53 670 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 SOBPA7XYQ1 873 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 GABRDO14764 452 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 ZNF263O14978 683 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 GABRR2P28476 465 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 CDC25CP30307 473 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 SNRPFP62306 86 aaKnown RBP14.34□□□□□ -0.11
CTSA-213ENST00000606782 STK4Q13043 487 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 VEPH1Q14D04 833 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 SURF1Q15526 300 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 NFE2Q16621 373 aaPredicted RBP14.34□□□□□ -0.11
CTSA-213ENST00000606782 KLHL40Q2TBA0 621 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 MGAT5BQ3V5L5 792 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 STXBP5Q5T5C0 1151 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 SCARA3Q6AZY7 606 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 ZC3H14Q6PJT7 736 aaKnown RBP14.34□□□□□ -0.11
CTSA-213ENST00000606782 DPH6Q7L8W6 267 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 CSGALNACT2Q8N6G5 542 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 TOP6BLQ8N6T0 577 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 HPS3Q969F9 1004 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 SMARCE1Q969G3 411 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 PKMYT1Q99640 499 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 LPIN3Q9BQK8 851 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 IER2Q9BTL4 223 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 NUP62CLQ9H1M0 184 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 ATXN3LQ9H3M9 355 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 PCIF1Q9H4Z3 704 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 TASP1Q9H6P5 420 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 ABCB6Q9NP58 842 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 TMLHEQ9NVH6 421 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 RMND1Q9NWS8 449 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 PATJQ8NI35 1801 aa14.34□□□□□ -0.11
CTSA-213ENST00000606782 TGFB1I1O43294 461 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 LAMTOR5O43504 91 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 HUS1O60921 280 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 LMNAP02545 664 aaKnown RBP14.33□□□□□ -0.12
CTSA-213ENST00000606782 F11P03951 625 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 HMGA1P17096 107 aaKnown RBP14.33□□□□□ -0.12
CTSA-213ENST00000606782 TSPY1Q01534 308 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 FAM26FQ5R3K3 315 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 C1orf228Q6PIY5 440 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 RBM43Q6ZSC3 357 aaKnown RBP14.33□□□□□ -0.12
CTSA-213ENST00000606782 TMEM150AQ86TG1 271 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 ADSSL1Q8N142 457 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 CCDC47Q96A33 483 aaKnown RBP14.33□□□□□ -0.12
CTSA-213ENST00000606782 MSANTD3Q96H12 275 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 LRRC3BQ96PB8 259 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 SEPT5Q99719 369 aaPredicted RBP14.33□□□□□ -0.12
CTSA-213ENST00000606782 CHRDQ9H2X0 955 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 SLITRK6Q9H5Y7 841 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 SLC39A2Q9NP94 309 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 EXOC1Q9NV70 894 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 SPATA6Q9NWH7 488 aaPredicted RBP14.33□□□□□ -0.12
CTSA-213ENST00000606782 HSPBP1Q9NZL4 362 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 PCDHB5Q9Y5E4 795 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 R4GN57 208 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 UBE4BO95155 1302 aa14.33□□□□□ -0.12
CTSA-213ENST00000606782 NUP210Q8TEM1 1887 aaPredicted RBP14.32□□□□□ -0.12
CTSA-213ENST00000606782 LHX1P48742 406 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 MYL7Q01449 175 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 DUOXA2Q1HG44 320 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 BMT2Q1RMZ1 405 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 SOWAHAQ2M3V2 549 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 ARHGAP29Q52LW3 1261 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 ARHGAP15Q53QZ3 475 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 INTS6LQ5JSJ4 861 aaKnown RBP14.32□□□□□ -0.12
CTSA-213ENST00000606782 GPR158Q5T848 1215 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 ZNF658Q5TYW1 1059 aaPredicted RBP14.32□□□□□ -0.12
CTSA-213ENST00000606782 CBWD2Q8IUF1 395 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 ZBTB44Q8NCP5 570 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 OR5B17Q8NGF7 314 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 SCFD1Q8WVM8 642 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 FAM3CQ92520 227 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms