RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 SLC8B1Q6J4K2 584 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 PDXDC1Q6P996 788 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 RNF19BQ6ZMZ0 732 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 Q7L0L9 218 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 ADGRD2Q7Z7M1 963 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 LRRTM3Q86VH5 581 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 PPFIBP1Q86W92 1011 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 UNC93AQ86WB7 457 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 DRC7Q8IY82 874 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 FAM71AQ8IYT1 594 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 TTC39CQ8N584 583 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 MRPL43Q8N983 215 aaKnown RBP8.18□□□□□ -1.1
MSH6-211ENST00000606499 MICAL1Q8TDZ2 1067 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 MRPL38Q96DV4 380 aaKnown RBP8.18□□□□□ -1.1
MSH6-211ENST00000606499 TMEM176AQ96HP8 235 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 PGLYRP2Q96PD5 576 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 ZSWIM1Q9BR11 485 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 ACBD6Q9BR61 282 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 NUP58Q9BVL2 599 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 NT5C1AQ9BXI3 368 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 RHOBTB2Q9BYZ6 727 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 ZCWPW1Q9H0M4 648 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 LMAN2LQ9H0V9 348 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 FAM124BQ9H5Z6 455 aaPredicted RBP8.18□□□□□ -1.1
MSH6-211ENST00000606499 RXFP1Q9HBX9 757 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 NGRNQ9NPE2 291 aaKnown RBP8.18□□□□□ -1.1
MSH6-211ENST00000606499 FNIP2Q9P278 1114 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 GTF3C4Q9UKN8 822 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 CDH9Q9ULB4 789 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 CAPN11Q9UMQ6 739 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 DAAM1Q9Y4D1 1078 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.18□□□□□ -1.1
MSH6-211ENST00000606499 BACE2Q9Y5Z0 518 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 IRAK3Q9Y616 596 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 MYO16Q9Y6X6 1858 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 FAM170AA1A519 330 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 CLDN5O00501 218 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 PER2O15055 1255 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 VNN2O95498 520 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 ADH1AP07327 375 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 PAEPP09466 180 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 TPM1P09493 284 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 SPATA31D3P0C874 917 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 CD19P15391 556 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 BRD2P25440 801 aaKnown RBP8.17□□□□□ -1.1
MSH6-211ENST00000606499 GNA15P30679 374 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 KRT9P35527 623 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 STAT1P42224 750 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 ADKP55263 362 aaKnown RBP8.17□□□□□ -1.1
MSH6-211ENST00000606499 ZBED6P86452 979 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 CYP27A1Q02318 531 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 CREMQ03060 361 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 ADGRE1Q14246 886 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 SPATA31D4Q6ZUB0 917 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.17□□□□□ -1.1
MSH6-211ENST00000606499 RBM23Q86U06 439 aaKnown RBP8.17□□□□□ -1.1
MSH6-211ENST00000606499 NOP9Q86U38 636 aaKnown RBP8.17□□□□□ -1.1
MSH6-211ENST00000606499 SLC47A2Q86VL8 602 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 PALB2Q86YC2 1186 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 GPR65Q8IYL9 337 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 FUKQ8N0W3 1084 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 CRYBG2Q8N1P7 616 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 TTC9BQ8N6N2 239 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 ZNF397Q8NF99 534 aaPredicted RBP8.17□□□□□ -1.1
MSH6-211ENST00000606499 MYCBPAPQ8TBZ2 947 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 SLC2A14Q8TDB8 520 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 EPS8L1Q8TE68 723 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 SLC20A1Q8WUM9 679 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 TFAP2BQ92481 460 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 MYLPFQ96A32 169 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 IQCDQ96DY2 449 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 PCED1BQ96HM7 432 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 TNIP3Q96KP6 325 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 HEXIM2Q96MH2 286 aaKnown RBP8.17□□□□□ -1.1
MSH6-211ENST00000606499 KLHL5Q96PQ7 755 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 EMILIN2Q9BXX0 1053 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 B3GNT5Q9BYG0 378 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 EDEM3Q9BZQ6 932 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 CRISPLD1Q9H336 500 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.17□□□□□ -1.1
MSH6-211ENST00000606499 ABHD10Q9NUJ1 306 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 ABI2Q9NYB9 513 aaPredicted RBP8.17□□□□□ -1.1
MSH6-211ENST00000606499 NOCTQ9UK39 431 aaKnown RBP8.17□□□□□ -1.1
MSH6-211ENST00000606499 SSX2IPQ9Y2D8 614 aa8.17□□□□□ -1.1
MSH6-211ENST00000606499 LUC7L2Q9Y383 392 aaKnown RBP8.17□□□□□ -1.1
MSH6-211ENST00000606499 MTMR11A4FU01 709 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 AKR1B15C9JRZ8 316 aaPredicted RBP8.16□□□□□ -1.1
MSH6-211ENST00000606499 O00370 1275 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 THAP12O43422 761 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 SOAT2O75908 522 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 CFHP08603 1231 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 VDRP11473 427 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 CYP11B1P15538 503 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 FERP16591 822 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 KLRC2P26717 231 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 ADORA2BP29275 332 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 GTF2F1P35269 517 aaKnown RBP eCLIP8.16□□□□□ -1.12e-7■■■■■ 27.6
MSH6-211ENST00000606499 MYH10P35580 1976 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 NRIP1P48552 1158 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 PDE6CP51160 858 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms