RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 A0A1W2PRU2 124 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 TRIM49BA6NDI0 452 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 CETN3O15182 167 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 MOSPD3O75425 235 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 WARSP23381 471 aaKnown RBP15.42■□□□□ 0.06
TUBE1-208ENST00000604743 CYP2F1P24903 491 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 RAP1GAPP47736 663 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 GCLMP48507 274 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 UBE2HP62256 183 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 STIM1Q13586 685 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 EDRF1Q3B7T1 1238 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 ZNF667Q5HYK9 610 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 C1orf220Q5T0J3 134 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 ANKRD40Q6AI12 368 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 INTS8Q75QN2 995 aaKnown RBP15.42■□□□□ 0.06
TUBE1-208ENST00000604743 SV2AQ7L0J3 742 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 LIMS2Q7Z4I7 341 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 SPATA2LQ8IUW3 424 aaPredicted RBP15.42■□□□□ 0.06
TUBE1-208ENST00000604743 SUGP1Q8IWZ8 645 aaKnown RBP15.42■□□□□ 0.06
TUBE1-208ENST00000604743 ELOA2Q8IYF1 753 aaPredicted RBP15.42■□□□□ 0.06
TUBE1-208ENST00000604743 LEMD2Q8NC56 503 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 SHKBP1Q8TBC3 707 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 SPATA18Q8TC71 538 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 PSMG2Q969U7 264 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 LRRC3Q9BY71 257 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 XYLT2Q9H1B5 865 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 GDE1Q9NZC3 331 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 CDH9Q9ULB4 789 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 ASB3Q9Y575 518 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 DENND4CQ5VZ89 1909 aa15.42■□□□□ 0.06
TUBE1-208ENST00000604743 ZDBF2Q9HCK1 2354 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 PTPRDP23468 1912 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 A8MXQ7 604 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 IKBKBO14920 756 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 MAPK13O15264 365 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 HLA-DRAP01903 254 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 EPB41P11171 864 aaKnown RBP15.41■□□□□ 0.06
TUBE1-208ENST00000604743 GABRR2P28476 465 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 PIK3CAP42336 1068 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 PMS1P54277 932 aaKnown RBP15.41■□□□□ 0.06
TUBE1-208ENST00000604743 EPHA5P54756 1037 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 CDH8P55286 799 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 CYP27A1Q02318 531 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 CAMK4Q16566 473 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 DDR2Q16832 855 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 ZACNQ401N2 412 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 KLHL10Q6JEL2 608 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 BMP8AQ7Z5Y6 402 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 TMC8Q8IU68 726 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 GPIHBP1Q8IV16 184 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 SCN4BQ8IWT1 228 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 ADSSL1Q8N142 457 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 MYLPFQ96A32 169 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 ZSWIM3Q96MP5 696 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 PKMYT1Q99640 499 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 ATXN3LQ9H3M9 355 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 MFSD1Q9H3U5 465 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 SMYD3Q9H7B4 428 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 CRTAC1Q9NQ79 661 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 CA14Q9ULX7 337 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 MAGED2Q9UNF1 606 aaPredicted RBP15.41■□□□□ 0.06
TUBE1-208ENST00000604743 HCN4Q9Y3Q4 1203 aa15.41■□□□□ 0.06
TUBE1-208ENST00000604743 PSMA7O14818 248 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 TACC1O75410 805 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 STAU1O95793 577 aaKnown RBP15.4■□□□□ 0.06
TUBE1-208ENST00000604743 SRFP11831 508 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 CD44P16070 742 aaKnown RBP15.4■□□□□ 0.06
TUBE1-208ENST00000604743 GPC5P78333 572 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 PPP3CAQ08209 521 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 SGSM1Q2NKQ1 1148 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 COBLL1Q53SF7 1204 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 MDH1BQ5I0G3 518 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 FAM78AQ5JUQ0 283 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 STXBP5Q5T5C0 1151 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 TANGO2Q6ICL3 276 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 SPOPLQ6IQ16 392 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 FAM171BQ6P995 826 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 C4orf50Q6ZRC1 276 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 SIX5Q8N196 739 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 FBXL6Q8N531 539 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 GTPBP4Q9BZE4 634 aaKnown RBP15.4■□□□□ 0.06
TUBE1-208ENST00000604743 PLA2G2FQ9BZM2 168 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 DPEP3Q9H4B8 488 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 MAGEC2Q9UBF1 373 aaPredicted RBP15.4■□□□□ 0.06
TUBE1-208ENST00000604743 NME7Q9Y5B8 376 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 OBSL1O75147 1896 aa15.4■□□□□ 0.06
TUBE1-208ENST00000604743 GREB1Q4ZG55 1949 aa15.39■□□□□ 0.05
TUBE1-208ENST00000604743 STK25O00506 426 aa15.39■□□□□ 0.05
TUBE1-208ENST00000604743 MICAL2O94851 1124 aa15.39■□□□□ 0.05
TUBE1-208ENST00000604743 BDNFP23560 247 aa15.39■□□□□ 0.05
TUBE1-208ENST00000604743 CCNE1P24864 410 aa15.39■□□□□ 0.05
TUBE1-208ENST00000604743 RPL10AP62906 217 aaKnown RBP15.39■□□□□ 0.05
TUBE1-208ENST00000604743 CYP4F8P98187 520 aa15.39■□□□□ 0.05
TUBE1-208ENST00000604743 FKBP3Q00688 224 aaKnown RBP15.39■□□□□ 0.05
TUBE1-208ENST00000604743 MAPRE1Q15691 268 aaKnown RBP15.39■□□□□ 0.05
TUBE1-208ENST00000604743 DCAF17Q5H9S7 520 aaPredicted RBP15.39■□□□□ 0.05
TUBE1-208ENST00000604743 TCERG1LQ5VWI1 586 aa15.39■□□□□ 0.05
TUBE1-208ENST00000604743 GAREM2Q75VX8 874 aa15.39■□□□□ 0.05
TUBE1-208ENST00000604743 FLCNQ8NFG4 579 aa15.39■□□□□ 0.05
TUBE1-208ENST00000604743 ZSCAN18Q8TBC5 510 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms