RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 ZCWPW1Q9H0M4 648 aa12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 DUS2Q9NX74 493 aaKnown RBP12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ABI2Q9NYB9 513 aaPredicted RBP12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 LRWD1Q9UFC0 647 aa12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 GPSM3Q9Y4H4 160 aa12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 WNT6Q9Y6F9 365 aa12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ATXN2Q99700 1313 aaKnown RBP12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SFI1A8K8P3 1242 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 LACTBL1A8MY62 500 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 E9PMD0 336 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 HAX1O00165 279 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 XPOTO43592 962 aaKnown RBP12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 JAK2O60674 1132 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SEC24BO95487 1268 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 F11P03951 625 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 HMGA1P17096 107 aaKnown RBP12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ENGP17813 658 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 PTGER3P43115 390 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 C2orf27AQ580R0 203 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ZPBP2Q6X784 338 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 LPCAT2Q7L5N7 544 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 PIP4P1Q86T03 277 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 PDZD3Q86UT5 571 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 MON1AQ86VX9 555 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 CHCHD4Q8N4Q1 142 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 TMEM161BQ8NDZ6 487 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 STKLD1Q8NE28 680 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SNX29Q8TEQ0 813 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 USP33Q8TEY7 942 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 MRPS31Q92665 395 aaKnown RBP12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ATP2A3Q93084 1043 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 HAPLN2Q9GZV7 340 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 C17orf75Q9HAS0 396 aa12.74□□□□□ -0.37
PDLIM1P1-201ENST00000604187 RALGAPA1Q6GYQ0 2036 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 H0Y626 953 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 TNFRSF10BO14763 440 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 EPB41L2O43491 1005 aaKnown RBP12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 TRIM16O95361 564 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 MAPTP10636 758 aaKnown RBP12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 HAPLN1P10915 354 aaPredicted RBP12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 IFNAR2P48551 515 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SEMA3BQ13214 749 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ZNF268Q14587 947 aaPredicted RBP12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ENOX2Q16206 610 aaKnown RBP12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 LRRTM3Q86VH5 581 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 TMEFF1Q8IYR6 380 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 CCDC33Q8N5R6 958 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 NSUN7Q8NE18 718 aaKnown RBP12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 CCDC26Q8TAB7 109 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 C2orf15Q8WU43 125 aaKnown RBP12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 OSCP1Q8WVF1 389 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SPIRE2Q8WWL2 714 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 RLN3Q8WXF3 142 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 GTF3C6Q969F1 213 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 BICD1Q96G01 975 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 TRPC7Q9HCX4 862 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 FSCN3Q9NQT6 498 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 TMEM74BQ9NUR3 256 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 MAGED2Q9UNF1 606 aaPredicted RBP12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 DNM3Q9UQ16 869 aa12.73□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SPAG17Q6Q759 2223 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ANTXRLA6NF34 631 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 MAP3K13O43283 966 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ZIC2O95409 532 aaPredicted RBP12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 CYP11A1P05108 521 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 CFIP05156 583 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 PLS3P13797 630 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 RDXP35241 583 aaKnown RBP12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 GPR15P49685 360 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 FAM193AP78312 1265 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 GUCY1B3Q02153 619 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 FAM160A1Q05DH4 1040 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 RAD51AP2Q09MP3 1159 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 USP4Q13107 963 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ORC2Q13416 577 aaPredicted RBP12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SAFBQ15424 915 aaKnown RBP eCLIP12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ZNF77Q15935 545 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 CRY1Q16526 586 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 COL28A1Q2UY09 1125 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 TTC38Q5R3I4 469 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SPATA1Q5VX52 437 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 C9orf57Q5W0N0 161 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 RINT1Q6NUQ1 792 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 C1orf186Q6ZWK4 172 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 METTL23Q86XA0 190 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SYT12Q8IV01 421 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 OLIG1Q8TAK6 271 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SPPL2BQ8TCT7 592 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 FAM212AQ96EL1 285 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SPACA7Q96KW9 195 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 FNBP1Q96RU3 617 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 GTPBP2Q9BX10 602 aaKnown RBP12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 MBD1Q9UIS9 605 aaPredicted RBP12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 DSEQ9UL01 958 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 MMP17Q9ULZ9 603 aa12.72□□□□□ -0.37
PDLIM1P1-201ENST00000604187 FAM221BA6H8Z2 402 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 PP2D1A8MPX8 630 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 UPK3BL1B0FP48 263 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms