RNA–Protein interactions for RNA: ENST00000602222.5

SMG9-213, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-213ENST00000602222 NLRP12P59046 1061 aa16.29■□□□□ 0.2
SMG9-213ENST00000602222 CYP4F8P98187 520 aa16.29■□□□□ 0.2
SMG9-213ENST00000602222 STK38Q15208 465 aa16.29■□□□□ 0.2
SMG9-213ENST00000602222 DGKKQ5KSL6 1271 aa16.29■□□□□ 0.2
SMG9-213ENST00000602222 TXNDC11Q6PKC3 985 aa16.29■□□□□ 0.2
SMG9-213ENST00000602222 STXBP4Q6ZWJ1 553 aa16.29■□□□□ 0.2
SMG9-213ENST00000602222 LIMS2Q7Z4I7 341 aa16.29■□□□□ 0.2
SMG9-213ENST00000602222 CMTM8Q8IZV2 173 aa16.29■□□□□ 0.2
SMG9-213ENST00000602222 GPD1LQ8N335 351 aa16.29■□□□□ 0.2
SMG9-213ENST00000602222 CSGALNACT2Q8N6G5 542 aa16.29■□□□□ 0.2
SMG9-213ENST00000602222 TOP6BLQ8N6T0 577 aa16.29■□□□□ 0.2
SMG9-213ENST00000602222 GPR161Q8N6U8 529 aaKnown RBP16.29■□□□□ 0.2
SMG9-213ENST00000602222 PDILTQ8N807 584 aa16.29■□□□□ 0.2
SMG9-213ENST00000602222 RMDN1Q96DB5 314 aa16.29■□□□□ 0.2
SMG9-213ENST00000602222 PKMYT1Q99640 499 aa16.29■□□□□ 0.2
SMG9-213ENST00000602222 PCIF1Q9H4Z3 704 aa16.29■□□□□ 0.2
SMG9-213ENST00000602222 SMG5Q9UPR3 1016 aaKnown RBP16.29■□□□□ 0.2
SMG9-213ENST00000602222 PRPF40AO75400 957 aaKnown RBP16.28■□□□□ 0.2
SMG9-213ENST00000602222 CXCL12P48061 93 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 SOX9P48436 509 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 LHX1P48742 406 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 CDR1P51861 262 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 RPL10AP62906 217 aaKnown RBP16.28■□□□□ 0.2
SMG9-213ENST00000602222 MYL7Q01449 175 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 BFSP1Q12934 665 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 SURF1Q15526 300 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 WDR44Q5JSH3 913 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 INTS6LQ5JSJ4 861 aaKnown RBP16.28■□□□□ 0.2
SMG9-213ENST00000602222 SCARA3Q6AZY7 606 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 DPH6Q7L8W6 267 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 SYNPOQ8N3V7 929 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 ZFYVE19Q96K21 471 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 ZNF396Q96N95 335 aaPredicted RBP16.28■□□□□ 0.2
SMG9-213ENST00000602222 FAM83CQ9BQN1 747 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 PI4K2AQ9BTU6 479 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 TRIM9Q9C026 710 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 FOXD4L1Q9NU39 408 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 INTS13Q9NVM9 706 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 THG1LQ9NWX6 298 aaKnown RBP16.28■□□□□ 0.2
SMG9-213ENST00000602222 DDX43Q9NXZ2 648 aaKnown RBP16.28■□□□□ 0.2
SMG9-213ENST00000602222 GTSE1Q9NYZ3 720 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 NCDNQ9UBB6 729 aa16.28■□□□□ 0.2
SMG9-213ENST00000602222 ZNF233A6NK53 670 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 EIF3DO15371 548 aaKnown RBP eCLIP16.27■□□□□ 0.2
SMG9-213ENST00000602222 YEATS4O95619 227 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 TMEM191BP0C7N4 346 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 PDIA4P13667 645 aaKnown RBP16.27■□□□□ 0.2
SMG9-213ENST00000602222 HOXD13P35453 343 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 AMPD3Q01432 767 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 SATB1Q01826 763 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 PUM1Q14671 1186 aaKnown RBP eCLIP16.27■□□□□ 0.2
SMG9-213ENST00000602222 SOWAHAQ2M3V2 549 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 CFAP221Q4G0U5 840 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 EPM2AIP1Q7L775 607 aaPredicted RBP16.27■□□□□ 0.2
SMG9-213ENST00000602222 MON1AQ86VX9 555 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 OSTM1Q86WC4 334 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 GLIS3Q8NEA6 775 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 ZNF507Q8TCN5 953 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 SECISBP2LQ93073 1101 aaKnown RBP16.27■□□□□ 0.2
SMG9-213ENST00000602222 TRMT2BQ96GJ1 504 aaKnown RBP16.27■□□□□ 0.2
SMG9-213ENST00000602222 FUBP3Q96I24 572 aaKnown RBP eCLIP16.27■□□□□ 0.2
SMG9-213ENST00000602222 ANKRD36BP1Q96IX9 119 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 MYRFLQ96LU7 910 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 MTMR12Q9C0I1 747 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 KIF9Q9HAQ2 790 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 KIAA1586Q9HCI6 787 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 DLL3Q9NYJ7 618 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 UXTQ9UBK9 157 aaPredicted RBP16.27■□□□□ 0.2
SMG9-213ENST00000602222 SNX9Q9Y5X1 595 aa16.27■□□□□ 0.2
SMG9-213ENST00000602222 NUP210Q8TEM1 1887 aaPredicted RBP16.27■□□□□ 0.19
SMG9-213ENST00000602222 CUTAO60888 179 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 NOL4O94818 638 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 CYP2F1P24903 491 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 PCSK1P29120 753 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 HOXA6P31267 233 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 AVPR1AP37288 418 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 GPR15P49685 360 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 TNK2Q07912 1038 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 MYO1EQ12965 1108 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 CCINQ13939 588 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 ZNF268Q14587 947 aaPredicted RBP16.26■□□□□ 0.19
SMG9-213ENST00000602222 DUOXA2Q1HG44 320 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 ITPRIPL2Q3MIP1 535 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 FAM171BQ6P995 826 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 ADGRF2Q8IZF7 708 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 IQUBQ8NA54 791 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 MRPS31Q92665 395 aaKnown RBP16.26■□□□□ 0.19
SMG9-213ENST00000602222 USP13Q92995 863 aaPredicted RBP16.26■□□□□ 0.19
SMG9-213ENST00000602222 SNX21Q969T3 373 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 FAM84AQ96KN4 292 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 C7orf25Q9BPX7 421 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 SMG9Q9H0W8 520 aaKnown RBP16.26■□□□□ 0.19
SMG9-213ENST00000602222 GKN1Q9NS71 199 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 RBM12Q9NTZ6 932 aaKnown RBP16.26■□□□□ 0.19
SMG9-213ENST00000602222 TDP1Q9NUW8 608 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 TFIP11Q9UBB9 837 aaKnown RBP16.26■□□□□ 0.19
SMG9-213ENST00000602222 GTF3C4Q9UKN8 822 aa16.26■□□□□ 0.19
SMG9-213ENST00000602222 TCHHQ07283 1943 aa16.25■□□□□ 0.19
SMG9-213ENST00000602222 K7ESF4 209 aa16.25■□□□□ 0.19
SMG9-213ENST00000602222 KRT19P08727 400 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms