RNA–Protein interactions for RNA: ENST00000602173.5

RAB4B-208, Transcript of RAB4B, member RAS oncogene family, human

TSL 3

Gene RAB4B, Length 592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB4B-208	ENST00000602173	TDGF1	P13385	188 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	SOX9	P48436	509 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	GPR15	P49685	360 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	NLRP12	P59046	1061 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	RBP5	P82980	135 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	BFSP1	Q12934	665 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	TAF12	Q16514	161 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	NFE2	Q16621	373 aa	Predicted RBP	13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	ARHGAP29	Q52LW3	1261 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	WDR44	Q5JSH3	913 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	CNNM4	Q6P4Q7	775 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	C1orf228	Q6PIY5	440 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	SHC4	Q6S5L8	630 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	STXBP4	Q6ZWJ1	553 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	OSTM1	Q86WC4	334 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	TMEM86A	Q8N2M4	240 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	SPATA18	Q8TC71	538 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	NOC3L	Q8WTT2	800 aa	Known RBP	13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	LEO1	Q8WVC0	666 aa	Predicted RBP	13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	DHX58	Q96C10	678 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	IPO9	Q96P70	1041 aa	Known RBP	13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	PKMYT1	Q99640	499 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	ACBD6	Q9BR61	282 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	PI4K2A	Q9BTU6	479 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	MTMR12	Q9C0I1	747 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	CUEDC2	Q9H467	287 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	INTS13	Q9NVM9	706 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	DDX43	Q9NXZ2	648 aa	Known RBP	13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	GTSE1	Q9NYZ3	720 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	ZMYM5	Q9UJ78	669 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	SNX9	Q9Y5X1	595 aa		13.44	□□□□□ -0.26
RAB4B-208	ENST00000602173	EML5	Q05BV3	1969 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	PTPRJ	Q12913	1337 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	MYOF	Q9NZM1	2061 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	ZNF233	A6NK53	670 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	SPECC1L-ADORA2A	F8WAN1	911 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	GABRD	O14764	452 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	CUTA	O60888	179 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	PRPF40A	O75400	957 aa	Known RBP	13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	KRT19	P08727	400 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	TMEM191B	P0C7N4	346 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	ACAT1	P24752	427 aa	Known RBP	13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	CTH	P32929	405 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	ID4	P47928	161 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	KPNA1	P52294	538 aa	Predicted RBP	13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	AMPD3	Q01432	767 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	MYL7	Q01449	175 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	GAS6	Q14393	721 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	INTS6L	Q5JSJ4	861 aa	Known RBP	13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	TXNDC11	Q6PKC3	985 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	RALGPS2	Q86X27	583 aa	Predicted RBP	13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	CBWD2	Q8IUF1	395 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	KIAA2013	Q8IYS2	634 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	CMTM8	Q8IZV2	173 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	TOP6BL	Q8N6T0	577 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	IQUB	Q8NA54	791 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	STKLD1	Q8NE28	680 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	OR5B17	Q8NGF7	314 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	ZNF507	Q8TCN5	953 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	BPIFB1	Q8TDL5	484 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	GCNA	Q96QF7	691 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	ABCB6	Q9NP58	842 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	GTF3C4	Q9UKN8	822 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	CACNA1A	O00555	2505 aa		13.43	□□□□□ -0.26
RAB4B-208	ENST00000602173	EIF3D	O15371	548 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	TGFB1I1	O43294	461 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	HCRT	O43612	131 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	CSH1	P0DML2	217 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	CSH2	P0DML3	217 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	CYP2F1	P24903	491 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	LHX1	P48742	406 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	CCR3	P51677	355 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	ASIC1	P78348	528 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	PLCB2	Q00722	1185 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	TNK2	Q07912	1038 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	EHHADH	Q08426	723 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	SURF1	Q15526	300 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	CCDC142	Q17RM4	750 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	SOWAHA	Q2M3V2	549 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	FAM26F	Q5R3K3	315 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	SDHAF4	Q5VUM1	108 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	LIMS2	Q7Z4I7	341 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	CELF5	Q8N6W0	485 aa	Known RBP	13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	MAB21L3	Q8N8X9	362 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	TTC8	Q8TAM2	541 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	ANKRD36BP1	Q96IX9	119 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	C7orf25	Q9BPX7	421 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	HINFP	Q9BQA5	517 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	SMG9	Q9H0W8	520 aa	Known RBP	13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	EPC1	Q9H2F5	836 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	RBM12	Q9NTZ6	932 aa	Known RBP	13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	HSPBP1	Q9NZL4	362 aa		13.42	□□□□□ -0.26
RAB4B-208	ENST00000602173	KIAA1549L	Q6ZVL6	1849 aa		13.41	□□□□□ -0.26
RAB4B-208	ENST00000602173	SOBP	A7XYQ1	873 aa		13.41	□□□□□ -0.26
RAB4B-208	ENST00000602173	ZSCAN22	P10073	491 aa	Predicted RBP	13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms