RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 ATF6P18850 670 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 GTF2H1P32780 548 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 TDGQ13569 410 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 MTMR3Q13615 1198 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 KLHL10Q6JEL2 608 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 TTI2Q6NXR4 508 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 TRIM67Q6ZTA4 783 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 PDZD4Q76G19 769 aaPredicted RBP17.89■□□□□ 0.45
SSBP4-213ENST00000602088 TMC8Q8IU68 726 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 UBALD2Q8IYN6 164 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 OR6B3Q8NGW1 331 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 NELFBQ8WX92 580 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 RSAD2Q8WXG1 361 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 NXPE3Q969Y0 559 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 GBP4Q96PP9 640 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 DUSP9Q99956 384 aaKnown RBP17.89■□□□□ 0.45
SSBP4-213ENST00000602088 PI4K2AQ9BTU6 479 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 CLSTN2Q9H4D0 955 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 TMEM8AQ9HCN3 771 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 ASAH2Q9NR71 780 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 GDE1Q9NZC3 331 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 NME7Q9Y5B8 376 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 TECTAO75443 2155 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 FAM86C2PA6NEL3 165 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 NRG2O14511 850 aaPredicted RBP17.88■□□□□ 0.45
SSBP4-213ENST00000602088 STX10O60499 249 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 MOSPD3O75425 235 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 MYL4P12829 197 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 PIK3CAP42336 1068 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 CDH8P55286 799 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 PSMC1P62191 440 aaKnown RBP17.88■□□□□ 0.45
SSBP4-213ENST00000602088 HTR4Q13639 388 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 CFAP221Q4G0U5 840 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 KRT39Q6A163 491 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 POTEHQ6S545 545 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 DNAJB7Q7Z6W7 309 aaPredicted RBP17.88■□□□□ 0.45
SSBP4-213ENST00000602088 ITIH5Q86UX2 942 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 TAS1R2Q8TE23 839 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 MCRS1Q96EZ8 462 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 LRFN3Q9BTN0 628 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 SMOC2Q9H3U7 446 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 SMYD3Q9H7B4 428 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 MMRN2Q9H8L6 949 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 CRTAC1Q9NQ79 661 aa17.88■□□□□ 0.45
SSBP4-213ENST00000602088 BICDL2A1A5D9 508 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 P4HA1P13674 534 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 CYP2F1P24903 491 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 SIGLEC14Q08ET2 396 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 VEPH1Q14D04 833 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 MAPRE1Q15691 268 aaKnown RBP17.87■□□□□ 0.45
SSBP4-213ENST00000602088 SPOPLQ6IQ16 392 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 PARM1Q6UWI2 310 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 FILIP1Q7Z7B0 1213 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 SPATA2LQ8IUW3 424 aaPredicted RBP17.87■□□□□ 0.45
SSBP4-213ENST00000602088 SLC44A3Q8N4M1 653 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 MYCBPAPQ8TBZ2 947 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 FAM200AQ8TCP9 573 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 GIPC2Q8TF65 315 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 FGF14Q92915 247 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 FUBP3Q96I24 572 aaKnown RBP eCLIP17.87■□□□□ 0.45
SSBP4-213ENST00000602088 CEP63Q96MT8 703 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 LPIN3Q9BQK8 851 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 IMPG2Q9BZV3 1241 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 SDCBP2Q9H190 292 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 ZNF334Q9HCZ1 680 aaPredicted RBP17.87■□□□□ 0.45
SSBP4-213ENST00000602088 ARMCX3Q9UH62 379 aaPredicted RBP17.87■□□□□ 0.45
SSBP4-213ENST00000602088 CTNND2Q9UQB3 1225 aa17.87■□□□□ 0.45
SSBP4-213ENST00000602088 A8MXQ7 604 aa17.86■□□□□ 0.45
SSBP4-213ENST00000602088 PRR33A8MZF0 331 aa17.86■□□□□ 0.45
SSBP4-213ENST00000602088 CLSTN1O94985 981 aa17.86■□□□□ 0.45
SSBP4-213ENST00000602088 PTPN1P18031 435 aaKnown RBP17.86■□□□□ 0.45
SSBP4-213ENST00000602088 MAGEA11P43364 429 aa17.86■□□□□ 0.45
SSBP4-213ENST00000602088 RAP1GAPP47736 663 aa17.86■□□□□ 0.45
SSBP4-213ENST00000602088 RPL10AP62906 217 aaKnown RBP17.86■□□□□ 0.45
SSBP4-213ENST00000602088 PAK1Q13153 545 aa17.86■□□□□ 0.45
SSBP4-213ENST00000602088 TCERG1LQ5VWI1 586 aa17.86■□□□□ 0.45
SSBP4-213ENST00000602088 SCARA5Q6ZMJ2 495 aa17.86■□□□□ 0.45
SSBP4-213ENST00000602088 C4orf50Q6ZRC1 276 aa17.86■□□□□ 0.45
SSBP4-213ENST00000602088 MTSS1LQ765P7 747 aa17.86■□□□□ 0.45
SSBP4-213ENST00000602088 ST13P5Q8NFI4 369 aaPredicted RBP17.86■□□□□ 0.45
SSBP4-213ENST00000602088 GPR152Q8TDT2 470 aa17.86■□□□□ 0.45
SSBP4-213ENST00000602088 DPEP3Q9H4B8 488 aa17.86■□□□□ 0.45
SSBP4-213ENST00000602088 METTL14Q9HCE5 456 aaKnown RBP17.86■□□□□ 0.45
SSBP4-213ENST00000602088 MAGEC2Q9UBF1 373 aaPredicted RBP17.86■□□□□ 0.45
SSBP4-213ENST00000602088 NUMBLQ9Y6R0 609 aa17.86■□□□□ 0.45
SSBP4-213ENST00000602088 TMEM221A6NGB7 291 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 M0R296 226 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 LRRN2O75325 713 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 GJA1P17302 382 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 ASPAP45381 313 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 GPR15P49685 360 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 MXI1P50539 228 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 STX17P56962 302 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 DDR2Q16832 855 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 MDH1BQ5I0G3 518 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 GAREM2Q75VX8 874 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 FRMD5Q7Z6J6 570 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 FBXL13Q8NEE6 735 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 SHKBP1Q8TBC3 707 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 SLC35C1Q96A29 364 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms