RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 TXNDC11Q6PKC3 985 aa18.27■□□□□ 0.52
SCAF1-204ENST00000601038 STXBP4Q6ZWJ1 553 aa18.27■□□□□ 0.52
SCAF1-204ENST00000601038 TMEM150AQ86TG1 271 aa18.27■□□□□ 0.52
SCAF1-204ENST00000601038 GPD1LQ8N335 351 aa18.27■□□□□ 0.52
SCAF1-204ENST00000601038 GPR161Q8N6U8 529 aaKnown RBP18.27■□□□□ 0.52
SCAF1-204ENST00000601038 PI4K2AQ9BTU6 479 aa18.27■□□□□ 0.52
SCAF1-204ENST00000601038 BACH2Q9BYV9 841 aa18.27■□□□□ 0.52
SCAF1-204ENST00000601038 TNMDQ9H2S6 317 aa18.27■□□□□ 0.52
SCAF1-204ENST00000601038 ABCB6Q9NP58 842 aa18.27■□□□□ 0.52
SCAF1-204ENST00000601038 KBTBD4Q9NVX7 518 aa18.27■□□□□ 0.52
SCAF1-204ENST00000601038 DDX43Q9NXZ2 648 aaKnown RBP18.27■□□□□ 0.52
SCAF1-204ENST00000601038 SPTLC2O15270 562 aa18.26■□□□□ 0.51
SCAF1-204ENST00000601038 PPP6R2O75170 966 aa18.26■□□□□ 0.51
SCAF1-204ENST00000601038 KRT19P08727 400 aa18.26■□□□□ 0.51
SCAF1-204ENST00000601038 CSH1P0DML2 217 aa18.26■□□□□ 0.51
SCAF1-204ENST00000601038 CSH2P0DML3 217 aa18.26■□□□□ 0.51
SCAF1-204ENST00000601038 DDX6P26196 483 aaKnown RBP eCLIP18.26■□□□□ 0.51
SCAF1-204ENST00000601038 MYL7Q01449 175 aa18.26■□□□□ 0.51
SCAF1-204ENST00000601038 BFSP1Q12934 665 aa18.26■□□□□ 0.51
SCAF1-204ENST00000601038 PUM1Q14671 1186 aaKnown RBP eCLIP18.26■□□□□ 0.51
SCAF1-204ENST00000601038 INTS6LQ5JSJ4 861 aaKnown RBP18.26■□□□□ 0.51
SCAF1-204ENST00000601038 TOP6BLQ8N6T0 577 aa18.26■□□□□ 0.51
SCAF1-204ENST00000601038 TTC8Q8TAM2 541 aa18.26■□□□□ 0.51
SCAF1-204ENST00000601038 NOC3LQ8WTT2 800 aaKnown RBP18.26■□□□□ 0.51
SCAF1-204ENST00000601038 PKMYT1Q99640 499 aa18.26■□□□□ 0.51
SCAF1-204ENST00000601038 CUEDC2Q9H467 287 aa18.26■□□□□ 0.51
SCAF1-204ENST00000601038 RBM12Q9NTZ6 932 aaKnown RBP18.26■□□□□ 0.51
SCAF1-204ENST00000601038 SIX4Q9UIU6 781 aa18.26■□□□□ 0.51
SCAF1-204ENST00000601038 SNX9Q9Y5X1 595 aa18.26■□□□□ 0.51
SCAF1-204ENST00000601038 GABRDO14764 452 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 TMEM191BP0C7N4 346 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 ACAT1P24752 427 aaKnown RBP18.25■□□□□ 0.51
SCAF1-204ENST00000601038 AVPR1AP37288 418 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 LHX1P48742 406 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 GPR15P49685 360 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 RPL10AP62906 217 aaKnown RBP18.25■□□□□ 0.51
SCAF1-204ENST00000601038 AMPD3Q01432 767 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 SATB1Q01826 763 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 TNK2Q07912 1038 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 E2F4Q16254 413 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 ITPRIPL2Q3MIP1 535 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 WDR44Q5JSH3 913 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 MAB21L3Q8N8X9 362 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 FAM84AQ96KN4 292 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 ZNF396Q96N95 335 aaPredicted RBP18.25■□□□□ 0.51
SCAF1-204ENST00000601038 TRIM9Q9C026 710 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 MTMR12Q9C0I1 747 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 SMG9Q9H0W8 520 aaKnown RBP18.25■□□□□ 0.51
SCAF1-204ENST00000601038 GKN1Q9NS71 199 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 INTS13Q9NVM9 706 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 DLL3Q9NYJ7 618 aa18.25■□□□□ 0.51
SCAF1-204ENST00000601038 TFIP11Q9UBB9 837 aaKnown RBP18.25■□□□□ 0.51
SCAF1-204ENST00000601038 UXTQ9UBK9 157 aaPredicted RBP18.25■□□□□ 0.51
SCAF1-204ENST00000601038 DENND4CQ5VZ89 1909 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 ZNF233A6NK53 670 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 PAPSS2O95340 614 aaPredicted RBP18.24■□□□□ 0.51
SCAF1-204ENST00000601038 CYP2F1P24903 491 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 PCSK1P29120 753 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 MYO1EQ12965 1108 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 PON2Q15165 354 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 SURF1Q15526 300 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 SOWAHAQ2M3V2 549 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 DPH6Q7L8W6 267 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 MON1AQ86VX9 555 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 OSTM1Q86WC4 334 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 ADGRF2Q8IZF7 708 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 SYNPOQ8N3V7 929 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 GLIS3Q8NEA6 775 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 MRPS31Q92665 395 aaKnown RBP18.24■□□□□ 0.51
SCAF1-204ENST00000601038 USP13Q92995 863 aaPredicted RBP18.24■□□□□ 0.51
SCAF1-204ENST00000601038 ANKRD36BP1Q96IX9 119 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 FAM83CQ9BQN1 747 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 KIAA1586Q9HCI6 787 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 TDP1Q9NUW8 608 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 GTF3C4Q9UKN8 822 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 MAGED2Q9UNF1 606 aaPredicted RBP18.24■□□□□ 0.51
SCAF1-204ENST00000601038 R3HCC1Q9Y3T6 440 aaKnown RBP18.24■□□□□ 0.51
SCAF1-204ENST00000601038 ZNF292O60281 2723 aa18.24■□□□□ 0.51
SCAF1-204ENST00000601038 DCHS1Q96JQ0 3298 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 NOL4O94818 638 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 YEATS4O95619 227 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 HOXD13P35453 343 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 CCINQ13939 588 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 DDR2Q16832 855 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 DUOXA2Q1HG44 320 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 CFAP221Q4G0U5 840 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 SDHAF4Q5VUM1 108 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 LMBRD2Q68DH5 695 aaPredicted RBP18.23■□□□□ 0.51
SCAF1-204ENST00000601038 TXNDC8Q6A555 127 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 CNNM4Q6P4Q7 775 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 Q6ZS52 159 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 DGLUCYQ7Z3D6 616 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 LIMS2Q7Z4I7 341 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 CBWD2Q8IUF1 395 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 IQUBQ8NA54 791 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 HPS3Q969F9 1004 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 TRMT2BQ96GJ1 504 aaKnown RBP18.23■□□□□ 0.51
SCAF1-204ENST00000601038 FUBP3Q96I24 572 aaKnown RBP eCLIP18.23■□□□□ 0.51
SCAF1-204ENST00000601038 HPDLQ96IR7 371 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 MYRFLQ96LU7 910 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms