RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 JRKLQ9Y4A0 524 aa12.3□□□□□ -0.44
ZNF548-211ENST00000600927 ANKRD62A6NC57 917 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 LACTBL1A8MY62 500 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 H3BQ06 376 aaPredicted RBP12.29□□□□□ -0.44
ZNF548-211ENST00000600927 PER2O15055 1255 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 SOD2P04179 222 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 HARSP12081 509 aaKnown RBP12.29□□□□□ -0.44
ZNF548-211ENST00000600927 KCNE1P15382 129 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 OR1G1P47890 313 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 YARSP54577 528 aaKnown RBP12.29□□□□□ -0.44
ZNF548-211ENST00000600927 HADHBP55084 474 aaKnown RBP12.29□□□□□ -0.44
ZNF548-211ENST00000600927 WNT7BP56706 349 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 NOP14P78316 857 aaKnown RBP12.29□□□□□ -0.44
ZNF548-211ENST00000600927 SLC10A6Q3KNW5 377 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 PUS10Q3MIT2 529 aaKnown RBP12.29□□□□□ -0.44
ZNF548-211ENST00000600927 PAPD7Q5XG87 772 aaKnown RBP12.29□□□□□ -0.44
ZNF548-211ENST00000600927 TMC7Q7Z402 723 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 RBM23Q86U06 439 aaKnown RBP12.29□□□□□ -0.44
ZNF548-211ENST00000600927 OR5B17Q8NGF7 314 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 WDR24Q96S15 920 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 RPS6KC1Q96S38 1066 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 PAAF1Q9BRP4 392 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 TLE6Q9H808 572 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 CYP3A43Q9HB55 503 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 CHST7Q9NS84 486 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 CNTN3Q9P232 1028 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 ITGA11Q9UKX5 1188 aa12.29□□□□□ -0.44
ZNF548-211ENST00000600927 PRG3Q9Y2Y8 225 aaPredicted RBP12.29□□□□□ -0.44
ZNF548-211ENST00000600927 SMIM28A0A1B0GU29 152 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 RCCD1A6NED2 376 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 GRXCR2A6NFK2 248 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 TMEM189-UBE2V1I3L0A0 370 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 DLL1O00548 723 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 XPOTO43592 962 aaKnown RBP12.28□□□□□ -0.44
ZNF548-211ENST00000600927 CLASP2O75122 1294 aaKnown RBP12.28□□□□□ -0.44
ZNF548-211ENST00000600927 RTN2O75298 545 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 CST3P01034 146 aaPredicted RBP12.28□□□□□ -0.44
ZNF548-211ENST00000600927 THP07101 528 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 TMEM253P0C7T8 217 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 P4HA1P13674 534 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 CYP11B1P15538 503 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 ACO1P21399 889 aaKnown RBP12.28□□□□□ -0.44
ZNF548-211ENST00000600927 PDE6CP51160 858 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 RBM10P98175 930 aaKnown RBP12.28□□□□□ -0.44
ZNF548-211ENST00000600927 CDR2Q01850 454 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 TRIM72Q6ZMU5 477 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 GPR65Q8IYL9 337 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 SLC35F6Q8N357 371 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 UBR7Q8N806 425 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 SMRP1Q8NCR6 262 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 MICAL1Q8TDZ2 1067 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 EPS8L1Q8TE68 723 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 NIF3L1Q9GZT8 377 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 IGFLR1Q9H665 355 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 CDC23Q9UJX2 597 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 NOCTQ9UK39 431 aaKnown RBP12.28□□□□□ -0.44
ZNF548-211ENST00000600927 ADAM28Q9UKQ2 775 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 BARX2Q9UMQ3 279 aaPredicted RBP12.28□□□□□ -0.44
ZNF548-211ENST00000600927 PTPRJQ12913 1337 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 C5orf42Q9H799 3197 aa12.28□□□□□ -0.44
ZNF548-211ENST00000600927 PDCD11Q14690 1871 aaKnown RBP12.27□□□□□ -0.44
ZNF548-211ENST00000600927 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.27□□□□□ -0.45
ZNF548-211ENST00000600927 RIOK3O14730 519 aaKnown RBP12.27□□□□□ -0.45
ZNF548-211ENST00000600927 CTIFO43310 598 aaKnown RBP12.27□□□□□ -0.45
ZNF548-211ENST00000600927 MBTPS2O43462 519 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 URI1O94763 535 aaPredicted RBP12.27□□□□□ -0.45
ZNF548-211ENST00000600927 KIF4AO95239 1232 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 SLU7O95391 586 aaKnown RBP12.27□□□□□ -0.45
ZNF548-211ENST00000600927 FAM163BP0C2L3 166 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 CXCL8P10145 99 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 IL9P15248 144 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 CYP3A5P20815 502 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 NDUFV1P49821 464 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 RBP5P82980 135 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 TFAMQ00059 246 aaKnown RBP12.27□□□□□ -0.45
ZNF548-211ENST00000600927 DSG1Q02413 1049 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 SOX4Q06945 474 aaPredicted RBP12.27□□□□□ -0.45
ZNF548-211ENST00000600927 SMAD4Q13485 552 aaKnown RBP12.27□□□□□ -0.45
ZNF548-211ENST00000600927 TMEM132DQ14C87 1099 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 ZBTB6Q15916 424 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 SEZ6Q53EL9 994 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 GLRA4Q5JXX5 417 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 KIAA0319Q5VV43 1072 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 PTCRAQ6ISU1 281 aaPredicted RBP12.27□□□□□ -0.45
ZNF548-211ENST00000600927 FUT10Q6P4F1 479 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 CD300LGQ6UXG3 332 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 TAS1R1Q7RTX1 841 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 RHOT2Q8IXI1 618 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 EFCAB13Q8IY85 973 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 OLIG1Q8TAK6 271 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 AUTS2Q8WXX7 1259 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 DDX1Q92499 740 aaKnown RBP12.27□□□□□ -0.45
ZNF548-211ENST00000600927 FAM212AQ96EL1 285 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 VCPIP1Q96JH7 1222 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 ZMAT2Q96NC0 199 aaKnown RBP12.27□□□□□ -0.45
ZNF548-211ENST00000600927 UHRF1Q96T88 793 aaPredicted RBP12.27□□□□□ -0.45
ZNF548-211ENST00000600927 IRX2Q9BZI1 471 aaPredicted RBP12.27□□□□□ -0.45
ZNF548-211ENST00000600927 GPR62Q9BZJ7 368 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 MTMR12Q9C0I1 747 aa12.27□□□□□ -0.45
ZNF548-211ENST00000600927 XYLT2Q9H1B5 865 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms