RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 F8W810 466 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 H0Y858 1186 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 TULP1O00294 542 aaPredicted RBP12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 WARSP23381 471 aaKnown RBP12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 IGFBP6P24592 240 aaPredicted RBP12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 BRCC3P46736 316 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 LHX1P48742 406 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 MFAP3P55082 362 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 DSG1Q02413 1049 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 TRIM14Q14142 442 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 SPECC1LQ69YQ0 1117 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 SPOPLQ6IQ16 392 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 PDXDC1Q6P996 788 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 DSTYKQ6XUX3 929 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 UNC93AQ86WB7 457 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 FMNL3Q8IVF7 1028 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 PDCL2Q8N4E4 241 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 NEK11Q8NG66 645 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 PIK3R5Q8WYR1 880 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 SHC3Q92529 594 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 CDCA3Q99618 268 aaPredicted RBP12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 TCF25Q9BQ70 676 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 HERC2P3Q9BVR0 1158 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 VN1R3Q9BXE9 311 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 STK33Q9BYT3 514 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 GPR62Q9BZJ7 368 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 POMKQ9H5K3 350 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 CEP72Q9P209 647 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 PUF60Q9UHX1 559 aaKnown RBP12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 L1RE1Q9UN81 338 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 SSX2IPQ9Y2D8 614 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.44□□□□□ -0.428e-9■■■□□ 14.7
CHMP2A-207ENST00000600804 IRAK3Q9Y616 596 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 C2CD4DB7Z1M9 353 aa12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 TBC1D4O60343 1298 aa12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 CTSAP10619 480 aa12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 TRIM21P19474 475 aaKnown RBP12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 JAM2P57087 298 aa12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 FAM171A1Q5VUB5 890 aa12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 PDE12Q6L8Q7 609 aaKnown RBP12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 ANKS3Q6ZW76 656 aa12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 ASCL5Q7RTU5 278 aa12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 ARHGEF19Q8IW93 802 aa12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 PPM1KQ8N3J5 372 aa12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 TMEM105Q8N8V8 129 aa12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 KBTBD7Q8WVZ9 684 aa12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 RABGGTAQ92696 567 aa12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 RIPOR3Q96MK2 946 aa12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 KREMEN1Q96MU8 473 aa12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 PRRX2Q99811 253 aa12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 TTPALQ9BTX7 342 aa12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 UBE2TQ9NPD8 197 aaPredicted RBP12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 NXF1Q9UBU9 619 aaKnown RBP12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 BACE2Q9Y5Z0 518 aa12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 EP300Q09472 2414 aaPredicted RBP12.43□□□□□ -0.42
CHMP2A-207ENST00000600804 LILRB3O75022 631 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 CILPO75339 1184 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 ADCY5O95622 1261 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 C1RP00736 705 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 WEE2P0C1S8 567 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 ACO1P21399 889 aaKnown RBP12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 KLK7P49862 253 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 ZNF132P52740 706 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 PLCB2Q00722 1185 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 YWHAHQ04917 246 aaPredicted RBP12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 LRMPQ12912 555 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 BMS1Q14692 1282 aaKnown RBP12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 ARID5BQ14865 1188 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 VARS2Q5ST30 1063 aaKnown RBP12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 KIAA0319Q5VV43 1072 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 WSCD1Q658N2 575 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 IQCEQ6IPM2 695 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 METTL23Q86XA0 190 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 ADGRF2Q8IZF7 708 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 KREMEN2Q8NCW0 462 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 HASPINQ8TF76 798 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 ATOH1Q92858 354 aaPredicted RBP12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 MMS19Q96T76 1030 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 ACBD6Q9BR61 282 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 DNAI2Q9GZS0 605 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 ZBP1Q9H171 429 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 SDCBP2Q9H190 292 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 NUCKS1Q9H1E3 243 aaKnown RBP12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 SMYD3Q9H7B4 428 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 NGRNQ9NPE2 291 aaKnown RBP12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 ENTPD7Q9NQZ7 604 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 CISHQ9NSE2 258 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 FAM207AQ9NSI2 230 aaPredicted RBP12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 DNAJC12Q9UKB3 198 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 POLIQ9UNA4 740 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 HCFC2Q9Y5Z7 792 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 FHOD1Q9Y613 1164 aa12.42□□□□□ -0.42
CHMP2A-207ENST00000600804 OR6C75A6NL08 312 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 PROB1E7EW31 1015 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 H7C4K7 107 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 EPHB6O15197 1021 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 PCSK1P29120 753 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 TKTP29401 623 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 193.1 ms