RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 PPP1R2P41236 205 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 VAMP7P51809 220 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 FKBP3Q00688 224 aaKnown RBP9.41□□□□□ -0.9
SSBP4-208ENST00000600628 INCA1Q0VD86 236 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 PLD1Q13393 1074 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 TDGQ13569 410 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 NCOA4Q13772 614 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 SGSM1Q2NKQ1 1148 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 WDR72Q3MJ13 1102 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 RBM43Q6ZSC3 357 aaKnown RBP9.41□□□□□ -0.9
SSBP4-208ENST00000600628 FAM186BQ8IYM0 893 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 DCP1BQ8IZD4 617 aaKnown RBP9.41□□□□□ -0.9
SSBP4-208ENST00000600628 HS6ST3Q8IZP7 471 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 THEM5Q8N1Q8 247 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 SLC44A3Q8N4M1 653 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 SHKBP1Q8TBC3 707 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 MYCBPAPQ8TBZ2 947 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 TAS1R2Q8TE23 839 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 FGF14Q92915 247 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 SLC35C1Q96A29 364 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 MYRFLQ96LU7 910 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 IPO9Q96P70 1041 aaKnown RBP9.41□□□□□ -0.9
SSBP4-208ENST00000600628 PGLYRP2Q96PD5 576 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 MRPL45Q9BRJ2 306 aaKnown RBP9.41□□□□□ -0.9
SSBP4-208ENST00000600628 RPP25Q9BUL9 199 aaKnown RBP9.41□□□□□ -0.9
SSBP4-208ENST00000600628 SDCBP2Q9H190 292 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 SMOC2Q9H3U7 446 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 FAM124BQ9H5Z6 455 aaPredicted RBP9.41□□□□□ -0.9
SSBP4-208ENST00000600628 APOBEC3GQ9HC16 384 aaKnown RBP9.41□□□□□ -0.9
SSBP4-208ENST00000600628 ZNF334Q9HCZ1 680 aaPredicted RBP9.41□□□□□ -0.9
SSBP4-208ENST00000600628 SLC2A4RGQ9NR83 387 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 TMEM30AQ9NV96 361 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 GTF3C4Q9UKN8 822 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 CDH9Q9ULB4 789 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 POLIQ9UNA4 740 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 FRMD4BQ9Y2L6 1034 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 SLC27A5Q9Y2P5 690 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 PCDHB5Q9Y5E4 795 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 NCANO14594 1321 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 SHISA7A6NL88 538 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 SOBPA7XYQ1 873 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 CETN3O15182 167 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 ATP2C2O75185 946 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 LRRN2O75325 713 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 ECI2O75521 394 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 SOAT2O75908 522 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 NOL4O94818 638 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 HLA-DRAP01903 254 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 TRIM49P0CI25 452 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 TRIM49CP0CI26 452 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 CEBPBP17676 345 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 ACAT1P24752 427 aaKnown RBP9.4□□□□□ -0.9
SSBP4-208ENST00000600628 ASPAP45381 313 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 MYL7Q01449 175 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 TSPY1Q01534 308 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 CEP135Q66GS9 1140 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 PARM1Q6UWI2 310 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 PAQR9Q6ZVX9 377 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 GET4Q7L5D6 327 aaPredicted RBP9.4□□□□□ -0.9
SSBP4-208ENST00000600628 DNAJB7Q7Z6W7 309 aaPredicted RBP9.4□□□□□ -0.9
SSBP4-208ENST00000600628 FILIP1Q7Z7B0 1213 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 CRYBG2Q8N1P7 616 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 WHAMMQ8TF30 809 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 NOC3LQ8WTT2 800 aaKnown RBP9.4□□□□□ -0.9
SSBP4-208ENST00000600628 RSAD2Q8WXG1 361 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 SEMA4DQ92854 862 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 EEF2KMTQ96G04 330 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 TRMT2BQ96GJ1 504 aaKnown RBP9.4□□□□□ -0.9
SSBP4-208ENST00000600628 ZNF512Q96ME7 567 aaPredicted RBP9.4□□□□□ -0.9
SSBP4-208ENST00000600628 ZSWIM3Q96MP5 696 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 CEP63Q96MT8 703 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 ASB16Q96NS5 453 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 CORO1BQ9BR76 489 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 TTLL2Q9BWV7 592 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 CLSTN2Q9H4D0 955 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 TMEM8AQ9HCN3 771 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 IL37Q9NZH6 218 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 NUMBLQ9Y6R0 609 aa9.4□□□□□ -0.9
SSBP4-208ENST00000600628 HELZP42694 1942 aaKnown RBP9.4□□□□□ -0.9
SSBP4-208ENST00000600628 PIEZO1Q92508 2521 aa9.4□□□□□ -0.91
SSBP4-208ENST00000600628 ARNTLO00327 626 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 ZNF197O14709 1029 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 TADA3O75528 432 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 F11P03951 625 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 SRFP11831 508 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 NPR3P17342 541 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 PTPN1P18031 435 aaKnown RBP9.39□□□□□ -0.91
SSBP4-208ENST00000600628 CYP2F1P24903 491 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 GNL1P36915 607 aaPredicted RBP9.39□□□□□ -0.91
SSBP4-208ENST00000600628 EPHB3P54753 998 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 CDH8P55286 799 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 MAPRE1Q15691 268 aaKnown RBP9.39□□□□□ -0.91
SSBP4-208ENST00000600628 ZNF699Q32M78 642 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 KRT39Q6A163 491 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 VSTM1Q6UX27 236 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 FRMD5Q7Z6J6 570 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 TRIM59Q8IWR1 403 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 FBXL6Q8N531 539 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 UBR7Q8N806 425 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 B3GALNT2Q8NCR0 500 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms