RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 GTF3C4Q9UKN8 822 aa13.88□□□□□ -0.19
SRRM1-223ENST00000600523 USTQ9Y2C2 406 aa13.88□□□□□ -0.19
SRRM1-223ENST00000600523 SLC27A5Q9Y2P5 690 aa13.88□□□□□ -0.19
SRRM1-223ENST00000600523 YIPF1Q9Y548 306 aa13.88□□□□□ -0.19
SRRM1-223ENST00000600523 SMTNL1A8MU46 457 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 BECN2A8MW95 431 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 KCNJ18B7U540 433 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 ZNF197O14709 1029 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 SEC24AO95486 1093 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 CAVIN2O95810 425 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 WEE2P0C1S8 567 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 PTPN1P18031 435 aaKnown RBP13.87□□□□□ -0.19
SRRM1-223ENST00000600523 LMO2P25791 158 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 ANXA13P27216 316 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 ASPAP45381 313 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 RAP1GAPP47736 663 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 CDH8P55286 799 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 PSMC1P62191 440 aaKnown RBP13.87□□□□□ -0.19
SRRM1-223ENST00000600523 TPM4P67936 248 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 KCNJ12Q14500 433 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 CFAP221Q4G0U5 840 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 PABPC1LQ4VXU2 614 aaKnown RBP13.87□□□□□ -0.19
SRRM1-223ENST00000600523 SPOPLQ6IQ16 392 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 VSTM1Q6UX27 236 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 GBP6Q6ZN66 633 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 GRASPQ7Z6J2 395 aaPredicted RBP13.87□□□□□ -0.19
SRRM1-223ENST00000600523 OSTM1Q86WC4 334 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 PLCD3Q8N3E9 789 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 TDRD5Q8NAT2 981 aaKnown RBP13.87□□□□□ -0.19
SRRM1-223ENST00000600523 MYCBPAPQ8TBZ2 947 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 RPGRIP1Q96KN7 1286 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 GCNAQ96QF7 691 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 TUBGCP2Q9BSJ2 902 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 MED10Q9BTT4 135 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 NT5C1AQ9BXI3 368 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 BCO2Q9BYV7 579 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 ELOVL4Q9GZR5 314 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 DNAJC25Q9H1X3 360 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 ASAH2Q9NR71 780 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.87□□□□□ -0.19
SRRM1-223ENST00000600523 CLUHO75153 1309 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 PLXNA3P51805 1871 aa13.87□□□□□ -0.19
SRRM1-223ENST00000600523 SYCE3A1L190 88 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 PAPLNO95428 1278 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 CD58P19256 250 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 FSHRP23945 695 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 GBP2P32456 591 aaPredicted RBP13.86□□□□□ -0.19
SRRM1-223ENST00000600523 NDST1P52848 882 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 CUL2Q13617 745 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 ANO6Q4KMQ2 910 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 HSP90AA4PQ58FG1 418 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 TCP11X2Q5H9J9 407 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 MDH1BQ5I0G3 518 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 FAM171BQ6P995 826 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 PDZD4Q76G19 769 aaPredicted RBP13.86□□□□□ -0.19
SRRM1-223ENST00000600523 LRRTM3Q86VH5 581 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 PPM1KQ8N3J5 372 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 EHBP1Q8NDI1 1231 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 SEMA4DQ92854 862 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 ZNF707Q96C28 371 aaPredicted RBP13.86□□□□□ -0.19
SRRM1-223ENST00000600523 CEP295NLQ96MC4 621 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 CORO1BQ9BR76 489 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 POMKQ9H5K3 350 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 GCNT4Q9P109 453 aa13.86□□□□□ -0.19
SRRM1-223ENST00000600523 ZFP37Q9Y6Q3 630 aaPredicted RBP13.86□□□□□ -0.19
SRRM1-223ENST00000600523 TSC2P49815 1807 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 MYBPHLA2RUH7 354 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 GTPBP10A4D1E9 387 aaKnown RBP13.85□□□□□ -0.19
SRRM1-223ENST00000600523 TRIM66O15016 1216 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 HAPLN1P10915 354 aaPredicted RBP13.85□□□□□ -0.19
SRRM1-223ENST00000600523 GRIK1P39086 918 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 ZNF165P49910 485 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 SLC8A3P57103 927 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 ZP2Q05996 745 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 INCA1Q0VD86 236 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 LRMPQ12912 555 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 EXOC3L4Q17RC7 722 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 VWA3BQ502W6 1294 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 FKBP15Q5T1M5 1219 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 C11orf57Q6ZUT1 292 aaPredicted RBP13.85□□□□□ -0.19
SRRM1-223ENST00000600523 GET4Q7L5D6 327 aaPredicted RBP13.85□□□□□ -0.19
SRRM1-223ENST00000600523 ENOSF1Q7L5Y1 443 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 ACOT1Q86TX2 421 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 SCN4BQ8IWT1 228 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 GJD3Q8N144 294 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 MYLPFQ96A32 169 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 PCED1BQ96HM7 432 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 MED15Q96RN5 788 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 BPIFA3Q9BQP9 254 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 NDST4Q9H3R1 872 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 APOBEC3GQ9HC16 384 aaKnown RBP13.85□□□□□ -0.19
SRRM1-223ENST00000600523 SAMSN1Q9NSI8 373 aaKnown RBP13.85□□□□□ -0.19
SRRM1-223ENST00000600523 MRPS23Q9Y3D9 190 aaKnown RBP13.85□□□□□ -0.19
SRRM1-223ENST00000600523 MTCL1Q9Y4B5 1905 aaKnown RBP13.85□□□□□ -0.19
SRRM1-223ENST00000600523 BRWD1Q9NSI6 2320 aa13.85□□□□□ -0.19
SRRM1-223ENST00000600523 ATP2C2O75185 946 aa13.84□□□□□ -0.19
SRRM1-223ENST00000600523 RHOP08100 348 aa13.84□□□□□ -0.19
SRRM1-223ENST00000600523 CSH1P0DML2 217 aa13.84□□□□□ -0.19
SRRM1-223ENST00000600523 CSH2P0DML3 217 aa13.84□□□□□ -0.19
SRRM1-223ENST00000600523 CYP2F1P24903 491 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms