RNA–Protein interactions for RNA: ENST00000600358.7

STRN4-218, Transcript of striatin 4, humanhuman

TSL 5

Gene STRN4, Length 1,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-218ENST00000600358 ZSWIM1Q9BR11 485 aa17.34■□□□□ 0.37
STRN4-218ENST00000600358 ZCWPW1Q9H0M4 648 aa17.34■□□□□ 0.37
STRN4-218ENST00000600358 KCNF1Q9H3M0 494 aa17.34■□□□□ 0.37
STRN4-218ENST00000600358 DPEP3Q9H4B8 488 aa17.34■□□□□ 0.37
STRN4-218ENST00000600358 NHEJ1Q9H9Q4 299 aaPredicted RBP17.34■□□□□ 0.37
STRN4-218ENST00000600358 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.34■□□□□ 0.37
STRN4-218ENST00000600358 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.34■□□□□ 0.37
STRN4-218ENST00000600358 IRAK3Q9Y616 596 aa17.34■□□□□ 0.37
STRN4-218ENST00000600358 THAP12O43422 761 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 HCRTO43612 131 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 LCA5LO95447 670 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 LSM8O95777 96 aaKnown RBP17.33■□□□□ 0.36
STRN4-218ENST00000600358 URODP06132 367 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 PLEKP08567 350 aaPredicted RBP17.33■□□□□ 0.36
STRN4-218ENST00000600358 SKILP12757 684 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 MYOGP15173 224 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 CHRNB2P17787 502 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 CYLC1P35663 651 aaPredicted RBP17.33■□□□□ 0.36
STRN4-218ENST00000600358 EIF4A3P38919 411 aaKnown RBP17.33■□□□□ 0.36
STRN4-218ENST00000600358 PSMD5Q16401 504 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 SLC18A3Q16572 532 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 SLC8B1Q6J4K2 584 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 LCLAT1Q6UWP7 414 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 TAS1R1Q7RTX1 841 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 DCP1BQ8IZD4 617 aaKnown RBP17.33■□□□□ 0.36
STRN4-218ENST00000600358 SLC30A5Q8TAD4 765 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 MYCBPAPQ8TBZ2 947 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 SLC20A1Q8WUM9 679 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 TFAP2BQ92481 460 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 HNRNPABQ99729 332 aaKnown RBP17.33■□□□□ 0.36
STRN4-218ENST00000600358 C17orf80Q9BSJ5 609 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 LHX5Q9H2C1 402 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 ACP6Q9NPH0 428 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 CRTAC1Q9NQ79 661 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 FNIP2Q9P278 1114 aa17.33■□□□□ 0.36
STRN4-218ENST00000600358 PUF60Q9UHX1 559 aaKnown RBP17.33■□□□□ 0.36
STRN4-218ENST00000600358 EIF3CLB5ME19 914 aaKnown RBP17.32■□□□□ 0.36
STRN4-218ENST00000600358 LILRB3O75022 631 aa17.32■□□□□ 0.36
STRN4-218ENST00000600358 PDGFRBP09619 1106 aa17.32■□□□□ 0.36
STRN4-218ENST00000600358 SETSIPP0DME0 302 aa17.32■□□□□ 0.36
STRN4-218ENST00000600358 CD19P15391 556 aa17.32■□□□□ 0.36
STRN4-218ENST00000600358 ACAT1P24752 427 aaKnown RBP17.32■□□□□ 0.36
STRN4-218ENST00000600358 BRD2P25440 801 aaKnown RBP17.32■□□□□ 0.36
STRN4-218ENST00000600358 KIF11P52732 1056 aa17.32■□□□□ 0.36
STRN4-218ENST00000600358 ORC1Q13415 861 aa17.32■□□□□ 0.36
STRN4-218ENST00000600358 NFE2Q16621 373 aaPredicted RBP17.32■□□□□ 0.36
STRN4-218ENST00000600358 CTXN3Q4LDR2 81 aa17.32■□□□□ 0.36
STRN4-218ENST00000600358 PKDCCQ504Y2 493 aa17.32■□□□□ 0.36
STRN4-218ENST00000600358 CHRDL2Q6WN34 429 aa17.32■□□□□ 0.36
STRN4-218ENST00000600358 CEP57Q86XR8 500 aa17.32■□□□□ 0.36
STRN4-218ENST00000600358 VPS52Q8N1B4 723 aa17.32■□□□□ 0.36
STRN4-218ENST00000600358 C2orf15Q8WU43 125 aaKnown RBP17.32■□□□□ 0.36
STRN4-218ENST00000600358 FUBP3Q96I24 572 aaKnown RBP eCLIP17.32■□□□□ 0.36
STRN4-218ENST00000600358 CCDC42Q96M95 316 aa17.32■□□□□ 0.36
STRN4-218ENST00000600358 HEXIM2Q96MH2 286 aaKnown RBP17.32■□□□□ 0.36
STRN4-218ENST00000600358 EIF3CQ99613 913 aaKnown RBP17.32■□□□□ 0.36
STRN4-218ENST00000600358 ZNF518BQ9C0D4 1074 aa17.32■□□□□ 0.36
STRN4-218ENST00000600358 DEF6Q9H4E7 631 aa17.32■□□□□ 0.36
STRN4-218ENST00000600358 RXFP1Q9HBX9 757 aa17.32■□□□□ 0.36
STRN4-218ENST00000600358 PLXNA3P51805 1871 aa17.32■□□□□ 0.36
STRN4-218ENST00000600358 MTCL1Q9Y4B5 1905 aaKnown RBP17.31■□□□□ 0.36
STRN4-218ENST00000600358 SOWAHDA6NJG2 315 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 DDX3XO00571 662 aaKnown RBP eCLIP17.31■□□□□ 0.36
STRN4-218ENST00000600358 CYP1A1P04798 512 aaPredicted RBP17.31■□□□□ 0.36
STRN4-218ENST00000600358 MMEP08473 750 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 GZMAP12544 262 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 TNFAIP3P21580 790 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 PBX2P40425 430 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 BCAT1P54687 386 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 PSMC1P62191 440 aaKnown RBP17.31■□□□□ 0.36
STRN4-218ENST00000600358 PTPN14Q15678 1187 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 LRIT3Q3SXY7 679 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 CFAP221Q4G0U5 840 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 PPP1R26Q5T8A7 1209 aaPredicted RBP17.31■□□□□ 0.36
STRN4-218ENST00000600358 PDE12Q6L8Q7 609 aaKnown RBP17.31■□□□□ 0.36
STRN4-218ENST00000600358 KIAA1841Q6NSI8 718 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 RAD9BQ6WBX8 426 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 C4orf50Q6ZRC1 276 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 FUKQ8N0W3 1084 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 SPPL3Q8TCT6 385 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 RIN2Q8WYP3 895 aaPredicted RBP17.31■□□□□ 0.36
STRN4-218ENST00000600358 CYFIP2Q96F07 1278 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 LMAN2LQ9H0V9 348 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 ABCB6Q9NP58 842 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 TSPAN16Q9UKR8 245 aa17.31■□□□□ 0.36
STRN4-218ENST00000600358 GREB1Q4ZG55 1949 aa17.3■□□□□ 0.36
STRN4-218ENST00000600358 MYBPHLA2RUH7 354 aa17.3■□□□□ 0.36
STRN4-218ENST00000600358 H3BNC9 293 aa17.3■□□□□ 0.36
STRN4-218ENST00000600358 FSCN2O14926 492 aa17.3■□□□□ 0.36
STRN4-218ENST00000600358 ATP2C2O75185 946 aa17.3■□□□□ 0.36
STRN4-218ENST00000600358 NDUFA10O95299 355 aa17.3■□□□□ 0.36
STRN4-218ENST00000600358 C1RP00736 705 aa17.3■□□□□ 0.36
STRN4-218ENST00000600358 DNAJB2P25686 324 aa17.3■□□□□ 0.36
STRN4-218ENST00000600358 NOMO3P69849 1222 aa17.3■□□□□ 0.36
STRN4-218ENST00000600358 CENPCQ03188 943 aa17.3■□□□□ 0.36
STRN4-218ENST00000600358 GPR17Q13304 367 aa17.3■□□□□ 0.36
STRN4-218ENST00000600358 CLEC16AQ2KHT3 1053 aa17.3■□□□□ 0.36
STRN4-218ENST00000600358 MDH1BQ5I0G3 518 aa17.3■□□□□ 0.36
STRN4-218ENST00000600358 C10orf76Q5T2E6 689 aa17.3■□□□□ 0.36
STRN4-218ENST00000600358 PPP2R2DQ66LE6 453 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms