RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 RDXP35241 583 aaKnown RBP15.06■□□□□ 0
SHKBP1-218ENST00000598907 ARL2P36404 184 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 POU5F1BQ06416 359 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 C19orf57Q0VDD7 668 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 DMC1Q14565 340 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 ARSHQ5FYA8 562 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 GPR158Q5T848 1215 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 TPGS2Q68CL5 300 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 NAIF1Q69YI7 327 aaPredicted RBP15.06■□□□□ 0
SHKBP1-218ENST00000598907 RINT1Q6NUQ1 792 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 C1orf186Q6ZWK4 172 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 MAEAQ7L5Y9 396 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 TMC8Q8IU68 726 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 BPIFB1Q8TDL5 484 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 PPP1R10Q96QC0 940 aaKnown RBP15.06■□□□□ 0
SHKBP1-218ENST00000598907 C7orf25Q9BPX7 421 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 NFKBIZQ9BYH8 718 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 FSCN3Q9NQT6 498 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 ATXN2Q99700 1313 aaKnown RBP15.06■□□□□ 0
SHKBP1-218ENST00000598907 MYH11P35749 1972 aa15.05■□□□□ 0
SHKBP1-218ENST00000598907 MYMKA6NI61 221 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 ENGP17813 658 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 PLCB2Q00722 1185 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 LMAN2Q12907 356 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 PSMD2Q13200 908 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 EEF1DP3Q658K8 133 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 ZNF280DQ6N043 979 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 RNF19BQ6ZMZ0 732 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 RBM43Q6ZSC3 357 aaKnown RBP15.05■□□□□ -0
SHKBP1-218ENST00000598907 GRAMD1CQ8IYS0 662 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 SPATA20Q8TB22 786 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 CRELD1Q96HD1 420 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 UROC1Q96N76 676 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 PGLYRP2Q96PD5 576 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 ADPGKQ9BRR6 497 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 NUSAP1Q9BXS6 441 aaKnown RBP15.05■□□□□ -0
SHKBP1-218ENST00000598907 TRIM9Q9C026 710 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 LRRC27Q9C0I9 530 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 NUP62CLQ9H1M0 184 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 ATXN3LQ9H3M9 355 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 GPRC5CQ9NQ84 441 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 PRMT7Q9NVM4 692 aaPredicted RBP15.05■□□□□ -0
SHKBP1-218ENST00000598907 CACNA2D2Q9NY47 1150 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 KCND2Q9NZV8 630 aa15.05■□□□□ -0
SHKBP1-218ENST00000598907 AFF4Q9UHB7 1163 aaKnown RBP15.05■□□□□ -0
SHKBP1-218ENST00000598907 ABCA7Q8IZY2 2146 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 ARHGEF35A5YM69 484 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 PRR29P0C7W0 189 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 AFMP43652 599 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 CYP4F8P98187 520 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 AMPD3Q01432 767 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 SOX4Q06945 474 aaPredicted RBP15.04■□□□□ -0
SHKBP1-218ENST00000598907 DPYDQ12882 1025 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 PRPF4BQ13523 1007 aaKnown RBP15.04■□□□□ -0
SHKBP1-218ENST00000598907 POSTNQ15063 836 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 CCDC183Q5T5S1 534 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 TRIM68Q6AZZ1 485 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 PADI6Q6TGC4 694 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 PPP4R3CPQ6ZMV5 832 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 RAB44Q7Z6P3 723 aaPredicted RBP15.04■□□□□ -0
SHKBP1-218ENST00000598907 PIP4P1Q86T03 277 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 GPBP1Q86WP2 473 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 TTC30AQ86WT1 665 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 TSTD1Q8NFU3 115 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 DNAJC19Q96DA6 116 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 CHFRQ96EP1 664 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 CCDC34Q96HJ3 373 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 RUSC1Q9BVN2 902 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 GTPBP2Q9BX10 602 aaKnown RBP15.04■□□□□ -0
SHKBP1-218ENST00000598907 LRRC3Q9BY71 257 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 FBRSL1Q9HCM7 1045 aaKnown RBP15.04■□□□□ -0
SHKBP1-218ENST00000598907 NUB1Q9Y5A7 615 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 CELSR3Q9NYQ7 3312 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 TENM4Q6N022 2769 aa15.04■□□□□ -0
SHKBP1-218ENST00000598907 FAM221BA6H8Z2 402 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 PODXLO00592 558 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 USO1O60763 962 aaKnown RBP15.03■□□□□ -0
SHKBP1-218ENST00000598907 DGAT1O75907 488 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 CFIP05156 583 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 EDN1P05305 212 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 GUCY2CP25092 1073 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 SEMA3BQ13214 749 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 PNOCQ13519 176 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 CUL4BQ13620 913 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 DHX8Q14562 1220 aaKnown RBP15.03■□□□□ -0
SHKBP1-218ENST00000598907 CAMK4Q16566 473 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 USP39Q53GS9 565 aaKnown RBP15.03■□□□□ -0
SHKBP1-218ENST00000598907 NT5DC1Q5TFE4 455 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 ANO7Q6IWH7 933 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 CAVIN1Q6NZI2 390 aaKnown RBP15.03■□□□□ -0
SHKBP1-218ENST00000598907 SYT13Q7L8C5 426 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 ZBTB8OSQ8IWT0 167 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 HDDC3Q8N4P3 179 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 DDX12PQ92771 950 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 PRIMPOLQ96LW4 560 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 TIPINQ9BVW5 301 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 DNAJC25Q9H1X3 360 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 EBF3Q9H4W6 596 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 HPS4Q9NQG7 708 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 GKN1Q9NS71 199 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms