RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 VCX3BQ9H321 246 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 VCX3AQ9NNX9 186 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 ARHGEF4Q9NR80 690 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 PRR12Q9ULL5 1215 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.31■□□□□ 0.2
IRF3-219ENST00000597636 DENND3A2RUS2 1198 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 GOLGA8SH3BPF8 625 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 GOLGA8MH3BSY2 632 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 SLC16A4O15374 487 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 PIAS1O75925 651 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 ARL4CP56559 192 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 MCL1Q07820 350 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 LRRC23Q53EV4 343 aaPredicted RBP16.31■□□□□ 0.2
IRF3-219ENST00000597636 CHSY1Q86X52 802 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 CCDC110Q8TBZ0 833 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 PYROXD1Q8WU10 500 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 TUBGCP5Q96RT8 1024 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 C11orf70Q9BRQ4 267 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 PI4K2AQ9BTU6 479 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 ACSS3Q9H6R3 686 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 MRPL47Q9HD33 250 aaKnown RBP16.31■□□□□ 0.2
IRF3-219ENST00000597636 SCAF8Q9UPN6 1271 aaKnown RBP16.31■□□□□ 0.2
IRF3-219ENST00000597636 SLC4A7Q9Y6M7 1214 aa16.31■□□□□ 0.2
IRF3-219ENST00000597636 COL11A2P13942 1736 aaPredicted RBP16.3■□□□□ 0.2
IRF3-219ENST00000597636 C2orf71A6NGG8 1288 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 B2RBV5 119 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 NDC80O14777 642 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 POLR2MP0CAP2 368 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 DHRS4L1P0CG22 281 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 MYL2P10916 166 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 DSG1Q02413 1049 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 TMEM179Q6ZVK1 233 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 TMPRSS6Q8IU80 811 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 ATP11CQ8NB49 1132 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 TMC2Q8TDI7 906 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 FNBP1Q96RU3 617 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 ECSITQ9BQ95 431 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 UBE2OQ9C0C9 1292 aaKnown RBP16.3■□□□□ 0.2
IRF3-219ENST00000597636 ARMCX1Q9P291 453 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 RAD17O75943 681 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 ATF7P17544 494 aaPredicted RBP16.3■□□□□ 0.2
IRF3-219ENST00000597636 RARRES1P49788 294 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 OASLQ15646 514 aaKnown RBP16.3■□□□□ 0.2
IRF3-219ENST00000597636 KLHL38Q2WGJ6 581 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 MFSD7Q6UXD7 560 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 C3orf62Q6ZUJ4 267 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 SLITRK1Q96PX8 696 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 NDNQ99608 321 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 NMUR2Q9GZQ4 415 aa16.3■□□□□ 0.2
IRF3-219ENST00000597636 DDX39AO00148 427 aaKnown RBP16.29■□□□□ 0.2
IRF3-219ENST00000597636 PYGLP06737 847 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 GTF2H1P32780 548 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 DSG3P32926 999 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 CPA2P48052 419 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 VCPP55072 806 aaKnown RBP16.29■□□□□ 0.2
IRF3-219ENST00000597636 PEX3P56589 373 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 RTP1P59025 263 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 TCP10Q12799 353 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 TBC1D10BQ4KMP7 808 aaPredicted RBP16.29■□□□□ 0.2
IRF3-219ENST00000597636 LIN52Q52LA3 116 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 NET1Q7Z628 596 aaPredicted RBP16.29■□□□□ 0.2
IRF3-219ENST00000597636 SMC1BQ8NDV3 1235 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 DCAKDQ8WVC6 231 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 FAM210AQ96ND0 272 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 PHACTR1Q9C0D0 580 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 COA1Q9GZY4 146 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 PCDH9Q9HC56 1237 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 RBBP6Q7Z6E9 1792 aaKnown RBP16.29■□□□□ 0.2
IRF3-219ENST00000597636 DDTLA6NHG4 134 aaPredicted RBP16.29■□□□□ 0.2
IRF3-219ENST00000597636 TLR3O15455 904 aaKnown RBP16.29■□□□□ 0.2
IRF3-219ENST00000597636 LPXNO60711 386 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 VIL1P09327 827 aaKnown RBP16.29■□□□□ 0.2
IRF3-219ENST00000597636 CRABP2P29373 138 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 ETV4P43268 484 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 ZFYVE27Q5T4F4 411 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 PLEKHA7Q6IQ23 1121 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 CCDC174Q6PII3 467 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 HHIPL2Q6UWX4 724 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 FAM43BQ6ZT52 329 aaPredicted RBP16.29■□□□□ 0.2
IRF3-219ENST00000597636 TTLL6Q8N841 843 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 RIT2Q99578 217 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 DNAJB4Q9UDY4 337 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 POLIQ9UNA4 740 aa16.29■□□□□ 0.2
IRF3-219ENST00000597636 FARP1Q9Y4F1 1045 aaPredicted RBP16.29■□□□□ 0.2
IRF3-219ENST00000597636 PDLIM1O00151 329 aa16.28■□□□□ 0.2
IRF3-219ENST00000597636 IFNB1P01574 187 aa16.28■□□□□ 0.2
IRF3-219ENST00000597636 IL1BP01584 269 aa16.28■□□□□ 0.2
IRF3-219ENST00000597636 P4HBP07237 508 aaKnown RBP16.28■□□□□ 0.2
IRF3-219ENST00000597636 CDK7P50613 346 aa16.28■□□□□ 0.2
IRF3-219ENST00000597636 BPIFB4P59827 614 aa16.28■□□□□ 0.2
IRF3-219ENST00000597636 TRMT5Q32P41 509 aaKnown RBP16.28■□□□□ 0.2
IRF3-219ENST00000597636 MIER3Q7Z3K6 550 aa16.28■□□□□ 0.2
IRF3-219ENST00000597636 SDCCAG8Q86SQ7 713 aaPredicted RBP16.28■□□□□ 0.2
IRF3-219ENST00000597636 MYLK4Q86YV6 388 aaPredicted RBP16.28■□□□□ 0.2
IRF3-219ENST00000597636 NKD2Q969F2 451 aaPredicted RBP16.28■□□□□ 0.2
IRF3-219ENST00000597636 TEKT1Q969V4 418 aa16.28■□□□□ 0.2
IRF3-219ENST00000597636 MFSD14AQ96MC6 490 aa16.28■□□□□ 0.2
IRF3-219ENST00000597636 CENPKQ9BS16 269 aa16.28■□□□□ 0.2
IRF3-219ENST00000597636 NDE1Q9NXR1 346 aa16.28■□□□□ 0.2
IRF3-219ENST00000597636 PI4KBQ9UBF8 816 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms