RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 C9orf50Q5SZB4 431 aa15.56■□□□□ 0.08
VRK3-212ENST00000596814 PPP1R26Q5T8A7 1209 aaPredicted RBP15.56■□□□□ 0.08
VRK3-212ENST00000596814 NAA35Q5VZE5 725 aa15.56■□□□□ 0.08
VRK3-212ENST00000596814 ARHGAP17Q68EM7 881 aa15.56■□□□□ 0.08
VRK3-212ENST00000596814 SLC39A11Q8N1S5 342 aa15.56■□□□□ 0.08
VRK3-212ENST00000596814 SP7Q8TDD2 431 aaPredicted RBP15.56■□□□□ 0.08
VRK3-212ENST00000596814 CYFIP2Q96F07 1278 aa15.56■□□□□ 0.08
VRK3-212ENST00000596814 TMEM169Q96HH4 297 aa15.56■□□□□ 0.08
VRK3-212ENST00000596814 PPP1R13BQ96KQ4 1090 aa15.56■□□□□ 0.08
VRK3-212ENST00000596814 RNPC3Q96LT9 517 aaKnown RBP15.56■□□□□ 0.08
VRK3-212ENST00000596814 ACBD6Q9BR61 282 aa15.56■□□□□ 0.08
VRK3-212ENST00000596814 AAASQ9NRG9 546 aa15.56■□□□□ 0.08
VRK3-212ENST00000596814 TSPAN16Q9UKR8 245 aa15.56■□□□□ 0.08
VRK3-212ENST00000596814 GOLGA6L9A6NEM1 432 aa15.55■□□□□ 0.08
VRK3-212ENST00000596814 M0QYV0 167 aa15.55■□□□□ 0.08
VRK3-212ENST00000596814 RTN2O75298 545 aa15.55■□□□□ 0.08
VRK3-212ENST00000596814 UNGP13051 313 aaPredicted RBP15.55■□□□□ 0.08
VRK3-212ENST00000596814 CCDC130P13994 396 aa15.55■□□□□ 0.08
VRK3-212ENST00000596814 PTPN1P18031 435 aaKnown RBP15.55■□□□□ 0.08
VRK3-212ENST00000596814 GOLGA7BQ2TAP0 167 aa15.55■□□□□ 0.08
VRK3-212ENST00000596814 VARS2Q5ST30 1063 aaKnown RBP15.55■□□□□ 0.08
VRK3-212ENST00000596814 KIAA0319Q5VV43 1072 aa15.55■□□□□ 0.08
VRK3-212ENST00000596814 PPP1R2P3Q6NXS1 205 aa15.55■□□□□ 0.08
VRK3-212ENST00000596814 LCLAT1Q6UWP7 414 aa15.55■□□□□ 0.08
VRK3-212ENST00000596814 CEP57Q86XR8 500 aa15.55■□□□□ 0.08
VRK3-212ENST00000596814 REXO1L1PQ8IX06 675 aa15.55■□□□□ 0.08
VRK3-212ENST00000596814 TMEM35BQ8NCS4 154 aa15.55■□□□□ 0.08
VRK3-212ENST00000596814 C1orf131Q8NDD1 294 aaKnown RBP15.55■□□□□ 0.08
VRK3-212ENST00000596814 LPIN3Q9BQK8 851 aa15.55■□□□□ 0.08
VRK3-212ENST00000596814 PACSIN1Q9BY11 444 aa15.55■□□□□ 0.08
VRK3-212ENST00000596814 CEP290O15078 2479 aa15.55■□□□□ 0.08
VRK3-212ENST00000596814 NLRC5Q86WI3 1866 aa15.55■□□□□ 0.08
VRK3-212ENST00000596814 A0A0U1RQJ8 604 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 FAM170AA1A519 330 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 ATP2C2O75185 946 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 OAZ2O95190 189 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 H2AFZP0C0S5 128 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 CDH5P33151 784 aaPredicted RBP15.54■□□□□ 0.08
VRK3-212ENST00000596814 PPM1AP35813 382 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 NSFP46459 744 aaKnown RBP15.54■□□□□ 0.08
VRK3-212ENST00000596814 TSPY1Q01534 308 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 CENPCQ03188 943 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 MDH1BQ5I0G3 518 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 INTS6LQ5JSJ4 861 aaKnown RBP15.54■□□□□ 0.08
VRK3-212ENST00000596814 ACAD10Q6JQN1 1059 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 ZNF280DQ6N043 979 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 DENND1BQ6P3S1 775 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 H2AFVQ71UI9 128 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 DNAAF5Q86Y56 855 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 OR10T2Q8NGX3 314 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 ATRIPQ8WXE1 791 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 ISCUQ9H1K1 167 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 LHX5Q9H2C1 402 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 CRTAC1Q9NQ79 661 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 SPG21Q9NZD8 308 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 HESX1Q9UBX0 185 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 TFR2Q9UP52 801 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 PCDHB12Q9Y5F1 795 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 EFEMP2O95967 443 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 FTLP02792 175 aaPredicted RBP15.54■□□□□ 0.08
VRK3-212ENST00000596814 ADORA2BP29275 332 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 KIF5AQ12840 1032 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 SHHQ15465 462 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 CCDC142Q17RM4 750 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 ARHGAP29Q52LW3 1261 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 ZNF662Q6ZS27 426 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 RNF168Q8IYW5 571 aaPredicted RBP15.54■□□□□ 0.08
VRK3-212ENST00000596814 SLC2A14Q8TDB8 520 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 CPA5Q8WXQ8 436 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 CLP1Q92989 425 aaKnown RBP15.54■□□□□ 0.08
VRK3-212ENST00000596814 B3GALT6Q96L58 329 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 TTPALQ9BTX7 342 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 TSGA10Q9BZW7 698 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 ZNF518BQ9C0D4 1074 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 LZTFL1Q9NQ48 299 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 INTUQ9ULD6 942 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 MYH10P35580 1976 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 GBF1Q92538 1859 aa15.54■□□□□ 0.08
VRK3-212ENST00000596814 MYBPHLA2RUH7 354 aa15.53■□□□□ 0.08
VRK3-212ENST00000596814 LCHNA4D1U4 455 aa15.53■□□□□ 0.08
VRK3-212ENST00000596814 ANKRD62A6NC57 917 aa15.53■□□□□ 0.08
VRK3-212ENST00000596814 RCCD1A6NED2 376 aa15.53■□□□□ 0.08
VRK3-212ENST00000596814 PJA2O43164 708 aa15.53■□□□□ 0.08
VRK3-212ENST00000596814 LINC00271P0C7V0 271 aa15.53■□□□□ 0.08
VRK3-212ENST00000596814 ABCB4P21439 1286 aa15.53■□□□□ 0.08
VRK3-212ENST00000596814 GALCP54803 685 aa15.53■□□□□ 0.08
VRK3-212ENST00000596814 USP41Q3LFD5 358 aa15.53■□□□□ 0.08
VRK3-212ENST00000596814 CTXN3Q4LDR2 81 aa15.53■□□□□ 0.08
VRK3-212ENST00000596814 RTP2Q5QGT7 225 aa15.53■□□□□ 0.08
VRK3-212ENST00000596814 MYCBPAPQ8TBZ2 947 aa15.53■□□□□ 0.08
VRK3-212ENST00000596814 CTNNBL1Q8WYA6 563 aaPredicted RBP15.53■□□□□ 0.08
VRK3-212ENST00000596814 VN1R3Q9BXE9 311 aa15.53■□□□□ 0.08
VRK3-212ENST00000596814 LACRTQ9GZZ8 138 aa15.53■□□□□ 0.08
VRK3-212ENST00000596814 H7C4K7 107 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 KRT86O43790 486 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 SOD2P04179 222 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 TMEM253P0C7T8 217 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 ARHGAP25P42331 645 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 BCAT1P54687 386 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 MRPL58Q14197 206 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms