RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 CACNA2D1P54289 1103 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 TNK2Q07912 1038 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 FCHO2Q0JRZ9 810 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 PLD1Q13393 1074 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 MGAT5BQ3V5L5 792 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 SV2CQ496J9 727 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 INTS6LQ5JSJ4 861 aaKnown RBP11.27□□□□□ -0.61
LIG1-213ENST00000596672 C1orf220Q5T0J3 134 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 GPR158Q5T848 1215 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 NAIF1Q69YI7 327 aaPredicted RBP11.27□□□□□ -0.61
LIG1-213ENST00000596672 FAM171BQ6P995 826 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 TRAPPC11Q7Z392 1133 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 LRRC52Q8N7C0 313 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 NELL1Q92832 810 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 PAGE5Q96GU1 130 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 SLC22A12Q96S37 553 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 MRPL45Q9BRJ2 306 aaKnown RBP11.27□□□□□ -0.61
LIG1-213ENST00000596672 TRMT61BQ9BVS5 477 aaKnown RBP11.27□□□□□ -0.61
LIG1-213ENST00000596672 ATXN3LQ9H3M9 355 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 CUEDC2Q9H467 287 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 GOLPH3LQ9H4A5 285 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 TMEM206Q9H813 350 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 BRD9Q9H8M2 597 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 DDX43Q9NXZ2 648 aaKnown RBP11.27□□□□□ -0.61
LIG1-213ENST00000596672 HSFX1Q9UBD0 423 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 ITGA11Q9UKX5 1188 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 SNX9Q9Y5X1 595 aa11.27□□□□□ -0.61
LIG1-213ENST00000596672 ZNF233A6NK53 670 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 LDHAP00338 332 aaKnown RBP11.26□□□□□ -0.61
LIG1-213ENST00000596672 KRT19P08727 400 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 PFKFB1P16118 471 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 PAX3P23760 479 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 NLRP12P59046 1061 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 PSMC1P62191 440 aaKnown RBP11.26□□□□□ -0.61
LIG1-213ENST00000596672 RBP5P82980 135 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 CYP24A1Q07973 514 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 MTAPQ13126 283 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 SNRNP35Q16560 246 aaKnown RBP11.26□□□□□ -0.61
LIG1-213ENST00000596672 ELMOD1Q8N336 334 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 SUMF1Q8NBK3 374 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 LEMD2Q8NC56 503 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 KCNG4Q8TDN1 519 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 DNASE1L2Q92874 299 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 HPDLQ96IR7 371 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 ACBD6Q9BR61 282 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 OSBPL6Q9BZF3 934 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 XYLT2Q9H1B5 865 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 KCTD10Q9H3F6 313 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 TRPV5Q9NQA5 729 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 RBM12Q9NTZ6 932 aaKnown RBP11.26□□□□□ -0.61
LIG1-213ENST00000596672 DMAC2Q9NW81 257 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 GTSE1Q9NYZ3 720 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 DSEQ9UL01 958 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 NDRG2Q9UN36 371 aaKnown RBP11.26□□□□□ -0.61
LIG1-213ENST00000596672 ASB3Q9Y575 518 aa11.26□□□□□ -0.61
LIG1-213ENST00000596672 TPRP12270 2363 aaKnown RBP11.25□□□□□ -0.61
LIG1-213ENST00000596672 MYO18AQ92614 2054 aaKnown RBP11.25□□□□□ -0.61
LIG1-213ENST00000596672 FAM237AA0A1B0GTK4 181 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 ANTXRLA6NF34 631 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 SLC38A8A6NNN8 435 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 PRPF40AO75400 957 aaKnown RBP11.25□□□□□ -0.61
LIG1-213ENST00000596672 VNN1O95497 513 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 SLFN14P0C7P3 912 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 CHRNB1P11230 501 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 PNPLA4P41247 253 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 TUFMP49411 452 aaKnown RBP11.25□□□□□ -0.61
LIG1-213ENST00000596672 USP46P62068 366 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 DLG4P78352 724 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 ZXDBP98169 803 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 PFKPQ01813 784 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 DMWDQ09019 674 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 PSMD6Q15008 389 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 KMT5BQ4FZB7 885 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 TXNDC8Q6A555 127 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 METTL23Q86XA0 190 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 ADGRF2Q8IZF7 708 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 THEM5Q8N1Q8 247 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 DCLK2Q8N568 766 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 TOP6BLQ8N6T0 577 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 SPPL2BQ8TCT7 592 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 CACTINQ8WUQ7 758 aaKnown RBP11.25□□□□□ -0.61
LIG1-213ENST00000596672 USP13Q92995 863 aaPredicted RBP11.25□□□□□ -0.61
LIG1-213ENST00000596672 CCDC127Q96BQ5 260 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 SHDQ96IW2 340 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 ZNF560Q96MR9 790 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 CYP2S1Q96SQ9 504 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 CGRRF1Q99675 332 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 SDCBP2Q9H190 292 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 DPEP3Q9H4B8 488 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 SLITRK6Q9H5Y7 841 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 TASP1Q9H6P5 420 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 FBRSL1Q9HCM7 1045 aaKnown RBP11.25□□□□□ -0.61
LIG1-213ENST00000596672 HPS4Q9NQG7 708 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 POLR3BQ9NW08 1133 aaPredicted RBP11.25□□□□□ -0.61
LIG1-213ENST00000596672 PCDHB5Q9Y5E4 795 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 PIAS3Q9Y6X2 628 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 GON4LQ3T8J9 2241 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 MYO16Q9Y6X6 1858 aa11.25□□□□□ -0.61
LIG1-213ENST00000596672 SPAG17Q6Q759 2223 aa11.24□□□□□ -0.61
LIG1-213ENST00000596672 PVALEFA0A1B0GWK0 134 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms