RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 ACCSQ96QU6 501 aa17.15■□□□□ 0.34
LINC02560-201ENST00000596379 FAM83CQ9BQN1 747 aa17.15■□□□□ 0.34
LINC02560-201ENST00000596379 SEMA4GQ9NTN9 838 aa17.15■□□□□ 0.34
LINC02560-201ENST00000596379 SEL1LQ9UBV2 794 aa17.15■□□□□ 0.34
LINC02560-201ENST00000596379 FBXO2Q9UK22 296 aaPredicted RBP17.15■□□□□ 0.34
LINC02560-201ENST00000596379 MAGED2Q9UNF1 606 aaPredicted RBP17.15■□□□□ 0.34
LINC02560-201ENST00000596379 EXOC7Q9UPT5 735 aa17.15■□□□□ 0.34
LINC02560-201ENST00000596379 OBSL1O75147 1896 aa17.14■□□□□ 0.33
LINC02560-201ENST00000596379 LRP3O75074 770 aa17.14■□□□□ 0.33
LINC02560-201ENST00000596379 ITGB3P05106 788 aa17.14■□□□□ 0.33
LINC02560-201ENST00000596379 GAP43P17677 238 aa17.14■□□□□ 0.33
LINC02560-201ENST00000596379 PNPLA4P41247 253 aa17.14■□□□□ 0.33
LINC02560-201ENST00000596379 BFSP1Q12934 665 aa17.14■□□□□ 0.33
LINC02560-201ENST00000596379 RUNX3Q13761 415 aa17.14■□□□□ 0.33
LINC02560-201ENST00000596379 NFE2Q16621 373 aaPredicted RBP17.14■□□□□ 0.33
LINC02560-201ENST00000596379 L1TD1Q5T7N2 865 aaKnown RBP17.14■□□□□ 0.33
LINC02560-201ENST00000596379 TXNDC8Q6A555 127 aa17.14■□□□□ 0.33
LINC02560-201ENST00000596379 SCARA3Q6AZY7 606 aa17.14■□□□□ 0.33
LINC02560-201ENST00000596379 TRIM68Q6AZZ1 485 aa17.14■□□□□ 0.33
LINC02560-201ENST00000596379 CEP68Q76N32 757 aa17.14■□□□□ 0.33
LINC02560-201ENST00000596379 BRSK2Q8IWQ3 736 aa17.14■□□□□ 0.33
LINC02560-201ENST00000596379 PDCL2Q8N4E4 241 aa17.14■□□□□ 0.33
LINC02560-201ENST00000596379 CACTINQ8WUQ7 758 aaKnown RBP17.14■□□□□ 0.33
LINC02560-201ENST00000596379 EBF3Q9H4W6 596 aa17.14■□□□□ 0.33
LINC02560-201ENST00000596379 HPS4Q9NQG7 708 aa17.14■□□□□ 0.33
LINC02560-201ENST00000596379 DDX43Q9NXZ2 648 aaKnown RBP17.14■□□□□ 0.33
LINC02560-201ENST00000596379 SRPRBQ9Y5M8 271 aaKnown RBP17.14■□□□□ 0.33
LINC02560-201ENST00000596379 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.13■□□□□ 0.33
LINC02560-201ENST00000596379 GOLGA8IPA6NC78 632 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 OTOL1A6NHN0 477 aaPredicted RBP17.13■□□□□ 0.33
LINC02560-201ENST00000596379 GOLGA8JA6NMD2 632 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 EXTL3O43909 919 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 HUS1O60921 280 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 GCNT3O95395 438 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 LDHAP00338 332 aaKnown RBP17.13■□□□□ 0.33
LINC02560-201ENST00000596379 CSH1P0DML2 217 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 CSH2P0DML3 217 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 CYP2F1P24903 491 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 DDX6P26196 483 aaKnown RBP eCLIP17.13■□□□□ 0.33
LINC02560-201ENST00000596379 HOXA6P31267 233 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 CASP5P51878 434 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 CSRP2Q16527 193 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 FSTL4Q6MZW2 842 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 FAM173BQ6P4H8 233 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 PKN3Q6P5Z2 889 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 MON1AQ86VX9 555 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 WDR5BQ86VZ2 330 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 SYCP3Q8IZU3 236 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 FAM160A2Q8N612 972 aaPredicted RBP17.13■□□□□ 0.33
LINC02560-201ENST00000596379 C1orf127Q8N9H9 656 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 NETO1Q8TDF5 533 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 FAM84AQ96KN4 292 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 ACBD6Q9BR61 282 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 TDP1Q9NUW8 608 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 L1RE1Q9UN81 338 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 PCDHB13Q9Y5F0 798 aa17.13■□□□□ 0.33
LINC02560-201ENST00000596379 SOBPA7XYQ1 873 aa17.12■□□□□ 0.33
LINC02560-201ENST00000596379 IDEP14735 1019 aa17.12■□□□□ 0.33
LINC02560-201ENST00000596379 GARTP22102 1010 aa17.12■□□□□ 0.33
LINC02560-201ENST00000596379 ACAT1P24752 427 aaKnown RBP17.12■□□□□ 0.33
LINC02560-201ENST00000596379 TXLNAP40222 546 aa17.12■□□□□ 0.33
LINC02560-201ENST00000596379 CEBPZQ03701 1054 aaKnown RBP17.12■□□□□ 0.33
LINC02560-201ENST00000596379 GRSF1Q12849 480 aaKnown RBP eCLIP17.12■□□□□ 0.33
LINC02560-201ENST00000596379 DDR2Q16832 855 aa17.12■□□□□ 0.33
LINC02560-201ENST00000596379 TMEM196Q5HYL7 178 aa17.12■□□□□ 0.33
LINC02560-201ENST00000596379 CC2D1AQ6P1N0 951 aaPredicted RBP17.12■□□□□ 0.33
LINC02560-201ENST00000596379 PRR23CQ6ZRP0 262 aa17.12■□□□□ 0.33
LINC02560-201ENST00000596379 OSTM1Q86WC4 334 aa17.12■□□□□ 0.33
LINC02560-201ENST00000596379 CSGALNACT2Q8N6G5 542 aa17.12■□□□□ 0.33
LINC02560-201ENST00000596379 CXorf38Q8TB03 319 aa17.12■□□□□ 0.33
LINC02560-201ENST00000596379 MRPS31Q92665 395 aaKnown RBP17.12■□□□□ 0.33
LINC02560-201ENST00000596379 CHFRQ96EP1 664 aa17.12■□□□□ 0.33
LINC02560-201ENST00000596379 CNTNAP3BQ96NU0 1288 aa17.12■□□□□ 0.33
LINC02560-201ENST00000596379 PANK2Q9BZ23 570 aa17.12■□□□□ 0.33
LINC02560-201ENST00000596379 CNTNAP3Q9BZ76 1288 aa17.12■□□□□ 0.33
LINC02560-201ENST00000596379 RBAKQ9NYW8 714 aaPredicted RBP17.12■□□□□ 0.33
LINC02560-201ENST00000596379 GTF3C4Q9UKN8 822 aa17.12■□□□□ 0.33
LINC02560-201ENST00000596379 TPRP12270 2363 aaKnown RBP17.11■□□□□ 0.33
LINC02560-201ENST00000596379 TRDMT1O14717 391 aaKnown RBP17.11■□□□□ 0.33
LINC02560-201ENST00000596379 SLC30A4O14863 429 aa17.11■□□□□ 0.33
LINC02560-201ENST00000596379 KRT19P08727 400 aa17.11■□□□□ 0.33
LINC02560-201ENST00000596379 ARSAP15289 507 aa17.11■□□□□ 0.33
LINC02560-201ENST00000596379 PDCP20941 246 aa17.11■□□□□ 0.33
LINC02560-201ENST00000596379 PXNP49023 591 aaPredicted RBP17.11■□□□□ 0.33
LINC02560-201ENST00000596379 RPL10AP62906 217 aaKnown RBP17.11■□□□□ 0.33
LINC02560-201ENST00000596379 MYL7Q01449 175 aa17.11■□□□□ 0.33
LINC02560-201ENST00000596379 CUL4AQ13619 759 aa17.11■□□□□ 0.33
LINC02560-201ENST00000596379 INTS6LQ5JSJ4 861 aaKnown RBP17.11■□□□□ 0.33
LINC02560-201ENST00000596379 TMEM86AQ8N2M4 240 aa17.11■□□□□ 0.33
LINC02560-201ENST00000596379 RIN3Q8TB24 985 aa17.11■□□□□ 0.33
LINC02560-201ENST00000596379 NOC3LQ8WTT2 800 aaKnown RBP17.11■□□□□ 0.33
LINC02560-201ENST00000596379 LEO1Q8WVC0 666 aaPredicted RBP17.11■□□□□ 0.33
LINC02560-201ENST00000596379 PKMYT1Q99640 499 aa17.11■□□□□ 0.33
LINC02560-201ENST00000596379 CBWD1Q9BRT8 395 aa17.11■□□□□ 0.33
LINC02560-201ENST00000596379 FGFBP2Q9BYJ0 223 aa17.11■□□□□ 0.33
LINC02560-201ENST00000596379 PCIF1Q9H4Z3 704 aa17.11■□□□□ 0.33
LINC02560-201ENST00000596379 KIF9Q9HAQ2 790 aa17.11■□□□□ 0.33
LINC02560-201ENST00000596379 FBRSL1Q9HCM7 1045 aaKnown RBP17.11■□□□□ 0.33
LINC02560-201ENST00000596379 OLFML3Q9NRN5 406 aa17.11■□□□□ 0.33
LINC02560-201ENST00000596379 SNX9Q9Y5X1 595 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms