RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 MGARPQ8TDB4 240 aa23.94■■□□□ 1.42
SRRM1-222ENST00000596378 ELOVL4Q9GZR5 314 aa23.94■■□□□ 1.42
SRRM1-222ENST00000596378 C10orf88Q9H8K7 445 aa23.94■■□□□ 1.42
SRRM1-222ENST00000596378 TBK1Q9UHD2 729 aa23.94■■□□□ 1.42
SRRM1-222ENST00000596378 ASAP2O43150 1006 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 ERBB2P04626 1255 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 EAPPQ56P03 285 aaPredicted RBP23.93■■□□□ 1.42
SRRM1-222ENST00000596378 HP1BP3Q5SSJ5 553 aaPredicted RBP23.93■■□□□ 1.42
SRRM1-222ENST00000596378 C9orf131Q5VYM1 1079 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 CYP4F22Q6NT55 531 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 DPH6Q7L8W6 267 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 CYP4X1Q8N118 509 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 CXorf38Q8TB03 319 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 AFG1LQ8WV93 481 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 SERPINB12Q96P63 405 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 METTL5Q9NRN9 209 aaKnown RBP23.93■■□□□ 1.42
SRRM1-222ENST00000596378 ASB14A6NK59 587 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 TAP1Q03518 808 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 CNGA2Q16280 664 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 MAMDC4Q6UXC1 1216 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 TAOK1Q7L7X3 1001 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 ALLCQ8N6M5 410 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 NIPA2Q8N8Q9 360 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 KAT2BQ92831 832 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 CABS1Q96KC9 395 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 RBM15Q96T37 977 aaKnown RBP eCLIP23.93■■□□□ 1.42
SRRM1-222ENST00000596378 TMEM121Q9BTD3 319 aa23.93■■□□□ 1.42
SRRM1-222ENST00000596378 LRCH4O75427 683 aa23.92■■□□□ 1.42
SRRM1-222ENST00000596378 ARF4P18085 180 aaPredicted RBP23.92■■□□□ 1.42
SRRM1-222ENST00000596378 SLC25A11Q02978 314 aaKnown RBP23.92■■□□□ 1.42
SRRM1-222ENST00000596378 GPS1Q13098 491 aa23.92■■□□□ 1.42
SRRM1-222ENST00000596378 SPRED3Q2MJR0 410 aa23.92■■□□□ 1.42
SRRM1-222ENST00000596378 GKAP1Q5VSY0 366 aaPredicted RBP23.92■■□□□ 1.42
SRRM1-222ENST00000596378 LRRC34Q8IZ02 419 aa23.92■■□□□ 1.42
SRRM1-222ENST00000596378 CACNA2D3Q8IZS8 1091 aa23.92■■□□□ 1.42
SRRM1-222ENST00000596378 BBOF1Q8ND07 529 aa23.92■■□□□ 1.42
SRRM1-222ENST00000596378 SYNCQ9H7C4 482 aa23.92■■□□□ 1.42
SRRM1-222ENST00000596378 MLXIPLQ9NP71 852 aa23.92■■□□□ 1.42
SRRM1-222ENST00000596378 STRIP2Q9ULQ0 834 aa23.92■■□□□ 1.42
SRRM1-222ENST00000596378 PLXNA1Q9UIW2 1896 aa23.92■■□□□ 1.42
SRRM1-222ENST00000596378 C3orf70A6NLC5 250 aaPredicted RBP23.92■■□□□ 1.42
SRRM1-222ENST00000596378 POLR2BP30876 1174 aaKnown RBP23.92■■□□□ 1.42
SRRM1-222ENST00000596378 ADCYAP1R1P41586 468 aa23.92■■□□□ 1.42
SRRM1-222ENST00000596378 SLC10A6Q3KNW5 377 aa23.92■■□□□ 1.42
SRRM1-222ENST00000596378 ZNF484Q5JVG2 852 aa23.92■■□□□ 1.42
SRRM1-222ENST00000596378 YTHDF3Q7Z739 585 aaKnown RBP23.92■■□□□ 1.42
SRRM1-222ENST00000596378 LHX5Q9H2C1 402 aa23.92■■□□□ 1.42
SRRM1-222ENST00000596378 SIGLEC16A6NMB1 481 aa23.91■■□□□ 1.42
SRRM1-222ENST00000596378 MED7O43513 233 aa23.91■■□□□ 1.42
SRRM1-222ENST00000596378 ADORA2AP29274 412 aa23.91■■□□□ 1.42
SRRM1-222ENST00000596378 PLCB3Q01970 1234 aa23.91■■□□□ 1.42
SRRM1-222ENST00000596378 PTPN11Q06124 597 aaPredicted RBP23.91■■□□□ 1.42
SRRM1-222ENST00000596378 MKRN3Q13064 507 aaKnown RBP23.91■■□□□ 1.42
SRRM1-222ENST00000596378 OASLQ15646 514 aaKnown RBP23.91■■□□□ 1.42
SRRM1-222ENST00000596378 TTC31Q49AM3 519 aaPredicted RBP23.91■■□□□ 1.42
SRRM1-222ENST00000596378 XYLT1Q86Y38 959 aa23.91■■□□□ 1.42
SRRM1-222ENST00000596378 ZCCHC9Q8N567 271 aaKnown RBP23.91■■□□□ 1.42
SRRM1-222ENST00000596378 NFKBIZQ9BYH8 718 aa23.91■■□□□ 1.42
SRRM1-222ENST00000596378 GGA2Q9UJY4 613 aa23.91■■□□□ 1.42
SRRM1-222ENST00000596378 CAPN7Q9Y6W3 813 aa23.91■■□□□ 1.42
SRRM1-222ENST00000596378 ZSWIM8A7E2V4 1837 aa23.91■■□□□ 1.42
SRRM1-222ENST00000596378 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.9■■□□□ 1.42
SRRM1-222ENST00000596378 TMEM120BA0PK00 339 aa23.9■■□□□ 1.42
SRRM1-222ENST00000596378 PIK3R2O00459 728 aa23.9■■□□□ 1.42
SRRM1-222ENST00000596378 DNALI1O14645 258 aaPredicted RBP23.9■■□□□ 1.42
SRRM1-222ENST00000596378 MICAL2O94851 1124 aa23.9■■□□□ 1.42
SRRM1-222ENST00000596378 CD48P09326 243 aa23.9■■□□□ 1.42
SRRM1-222ENST00000596378 MAGEA4P43358 317 aa23.9■■□□□ 1.42
SRRM1-222ENST00000596378 VCPP55072 806 aaKnown RBP23.9■■□□□ 1.42
SRRM1-222ENST00000596378 LMNB2Q03252 620 aa23.9■■□□□ 1.42
SRRM1-222ENST00000596378 ADCY1Q08828 1119 aa23.9■■□□□ 1.42
SRRM1-222ENST00000596378 VSTM1Q6UX27 236 aa23.9■■□□□ 1.42
SRRM1-222ENST00000596378 SAYSD1Q9NPB0 183 aa23.9■■□□□ 1.42
SRRM1-222ENST00000596378 DDX56Q9NY93 547 aaKnown RBP23.9■■□□□ 1.42
SRRM1-222ENST00000596378 PCSK1NQ9UHG2 260 aa23.9■■□□□ 1.42
SRRM1-222ENST00000596378 CILPO75339 1184 aa23.9■■□□□ 1.42
SRRM1-222ENST00000596378 IFNB1P01574 187 aa23.9■■□□□ 1.42
SRRM1-222ENST00000596378 MCF2P10911 925 aa23.9■■□□□ 1.42
SRRM1-222ENST00000596378 EPHX2P34913 555 aa23.9■■□□□ 1.42
SRRM1-222ENST00000596378 COPS2P61201 443 aa23.9■■□□□ 1.42
SRRM1-222ENST00000596378 LAMC2Q13753 1193 aa23.9■■□□□ 1.42
SRRM1-222ENST00000596378 FASTKD3Q14CZ7 662 aaKnown RBP23.9■■□□□ 1.42
SRRM1-222ENST00000596378 DRICH1Q6PGQ1 229 aaPredicted RBP23.9■■□□□ 1.42
SRRM1-222ENST00000596378 LINC01465Q8N7H1 131 aa23.9■■□□□ 1.42
SRRM1-222ENST00000596378 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.9■■□□□ 1.42
SRRM1-222ENST00000596378 M0QYV0 167 aa23.89■■□□□ 1.42
SRRM1-222ENST00000596378 CPP00450 1065 aa23.89■■□□□ 1.42
SRRM1-222ENST00000596378 PECAM1P16284 738 aaPredicted RBP23.89■■□□□ 1.42
SRRM1-222ENST00000596378 YBX3P16989 372 aaKnown RBP eCLIP23.89■■□□□ 1.42
SRRM1-222ENST00000596378 TAF5Q15542 800 aa23.89■■□□□ 1.42
SRRM1-222ENST00000596378 FBXW10Q5XX13 1052 aa23.89■■□□□ 1.42
SRRM1-222ENST00000596378 ILDR2Q71H61 639 aa23.89■■□□□ 1.42
SRRM1-222ENST00000596378 ANKRD42Q8N9B4 389 aa23.89■■□□□ 1.42
SRRM1-222ENST00000596378 UBA3Q8TBC4 463 aa23.89■■□□□ 1.42
SRRM1-222ENST00000596378 NLRP7Q8WX94 980 aa23.89■■□□□ 1.42
SRRM1-222ENST00000596378 OSBPL7Q9BZF2 842 aa23.89■■□□□ 1.42
SRRM1-222ENST00000596378 AGAP1Q9UPQ3 857 aa23.89■■□□□ 1.42
SRRM1-222ENST00000596378 SGK1O00141 431 aa23.89■■□□□ 1.41
SRRM1-222ENST00000596378 GH1P01241 217 aa23.89■■□□□ 1.41
SRRM1-222ENST00000596378 PTPN7P35236 360 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms