RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 TMEM221A6NGB7 291 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 M0R296 226 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 BIN1O00499 593 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 PHACTR2O75167 634 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 LRRN2O75325 713 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 MICAL2O94851 1124 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 ASS1P00966 412 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 PDGFBP01127 241 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 PDGFRBP09619 1106 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 GJA1P17302 382 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 CCNE1P24864 410 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 CYP2F1P24903 491 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 PCSK1P29120 753 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 RAP1GAPP47736 663 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 ALDH1A3P47895 512 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 GCLMP48507 274 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 GPR15P49685 360 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 EPHB3P54753 998 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 TNNC1P63316 161 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 ENPEPQ07075 957 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 PLD1Q13393 1074 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 TDGQ13569 410 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 ZNF699Q32M78 642 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 MGAT5BQ3V5L5 792 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 IQCEQ6IPM2 695 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 SPOPLQ6IQ16 392 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 GAREM2Q75VX8 874 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 PDZD4Q76G19 769 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 DNAJB7Q7Z6W7 309 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 UBALD2Q8IYN6 164 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 ELMOD1Q8N336 334 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 SLC44A3Q8N4M1 653 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 STKLD1Q8NE28 680 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 SHKBP1Q8TBC3 707 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 GPR152Q8TDT2 470 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 SYAP1Q96A49 352 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 MCRS1Q96EZ8 462 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 SYT15Q9BQS2 421 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 PI4K2AQ9BTU6 479 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 DPEP3Q9H4B8 488 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 ASAH2Q9NR71 780 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 NXF1Q9UBU9 619 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 DUSP12Q9UNI6 340 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 PCDHB5Q9Y5E4 795 aa11.76□□□□□ -0.53
SHKBP1-206ENST00000595523 CETN3O15182 167 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 HLA-DRAP01903 254 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 MYL4P12829 197 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 HMGA1P17096 107 aaKnown RBP11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 FCARP24071 287 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 ASPAP45381 313 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 TUFMP49411 452 aaKnown RBP11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 CDH8P55286 799 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 FKBP3Q00688 224 aaKnown RBP11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 LRRC63Q05C16 580 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 CAMK4Q16566 473 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 NFE2Q16621 373 aaPredicted RBP11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 CFAP221Q4G0U5 840 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 STXBP5Q5T5C0 1151 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 SDHAF4Q5VUM1 108 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 TTI2Q6NXR4 508 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 SCARA5Q6ZMJ2 495 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 TAS1R2Q8TE23 839 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 GIPC2Q8TF65 315 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 MYLPFQ96A32 169 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 DHTKD1Q96HY7 919 aaPredicted RBP11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 ZSWIM3Q96MP5 696 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 DUSP9Q99956 384 aaKnown RBP11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 GTPBP4Q9BZE4 634 aaKnown RBP11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 IL21Q9HBE4 155 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 APOBEC3GQ9HC16 384 aaKnown RBP11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 ABCB6Q9NP58 842 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 GDE1Q9NZC3 331 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 RAPGEFL1Q9UHV5 662 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 CDH9Q9ULB4 789 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 ASB3Q9Y575 518 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 NCANO14594 1321 aa11.75□□□□□ -0.53
SHKBP1-206ENST00000595523 A0A1W2PRU2 124 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 ZNF197O14709 1029 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 PSMA7O14818 248 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 SLC16A3O15427 465 aaKnown RBP11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 FAM163BP0C2L3 166 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 EPB41P11171 864 aaKnown RBP11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 KRT13P13646 458 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 GNL1P36915 607 aaPredicted RBP11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 PIK3CAP42336 1068 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 TEAD2Q15562 447 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 DDR2Q16832 855 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 SGSM1Q2NKQ1 1148 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 ZNF667Q5HYK9 610 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 FAM78AQ5JUQ0 283 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 CYP4A22Q5TCH4 519 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 KLHL10Q6JEL2 608 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 BMP8AQ7Z5Y6 402 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 TMEM150AQ86TG1 271 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 LEMD2Q8NC56 503 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 OR6B3Q8NGW1 331 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 TAF4BQ92750 862 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 SEMA4DQ92854 862 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 NXPE3Q969Y0 559 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 PCED1BQ96HM7 432 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms