RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 HCRTO43612 131 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 STAU1O95793 577 aaKnown RBP16.19■□□□□ 0.18
TRIM28-205ENST00000595028 CFHP08603 1231 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 HAPLN1P10915 354 aaPredicted RBP16.19■□□□□ 0.18
TRIM28-205ENST00000595028 NR2F2P24468 414 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 PCSK1P29120 753 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 AP3M2P53677 418 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 CLDN10P78369 228 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 VEPH1Q14D04 833 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 NFIL3Q16649 462 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 CCDC142Q17RM4 750 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 ZCWPW2Q504Y3 356 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 TDRD10Q5VZ19 366 aaKnown RBP16.19■□□□□ 0.18
TRIM28-205ENST00000595028 SIX5Q8N196 739 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 SHKBP1Q8TBC3 707 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 TIGD1Q96MW7 591 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 LPIN3Q9BQK8 851 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 MFSD1Q9H3U5 465 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 RMND1Q9NWS8 449 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 WNT16Q9UBV4 365 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 PCDHB5Q9Y5E4 795 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 DENND4CQ5VZ89 1909 aa16.19■□□□□ 0.18
TRIM28-205ENST00000595028 CFAP47Q6ZTR5 3102 aa16.18■□□□□ 0.18
TRIM28-205ENST00000595028 ECI2O75521 394 aa16.18■□□□□ 0.18
TRIM28-205ENST00000595028 CST3P01034 146 aaPredicted RBP16.18■□□□□ 0.18
TRIM28-205ENST00000595028 GJA1P17302 382 aa16.18■□□□□ 0.18
TRIM28-205ENST00000595028 WARSP23381 471 aaKnown RBP16.18■□□□□ 0.18
TRIM28-205ENST00000595028 FCARP24071 287 aa16.18■□□□□ 0.18
TRIM28-205ENST00000595028 CLCN5P51795 746 aa16.18■□□□□ 0.18
TRIM28-205ENST00000595028 BIRC3Q13489 604 aa16.18■□□□□ 0.18
TRIM28-205ENST00000595028 TRPC3Q13507 836 aa16.18■□□□□ 0.18
TRIM28-205ENST00000595028 TEAD2Q15562 447 aa16.18■□□□□ 0.18
TRIM28-205ENST00000595028 CEP135Q66GS9 1140 aa16.18■□□□□ 0.18
TRIM28-205ENST00000595028 CWF19L1Q69YN2 538 aaKnown RBP16.18■□□□□ 0.18
TRIM28-205ENST00000595028 DNAJB7Q7Z6W7 309 aaPredicted RBP16.18■□□□□ 0.18
TRIM28-205ENST00000595028 SMYD4Q8IYR2 804 aaPredicted RBP16.18■□□□□ 0.18
TRIM28-205ENST00000595028 FAM200AQ8TCP9 573 aa16.18■□□□□ 0.18
TRIM28-205ENST00000595028 GPR152Q8TDT2 470 aa16.18■□□□□ 0.18
TRIM28-205ENST00000595028 CNTNAP3BQ96NU0 1288 aa16.18■□□□□ 0.18
TRIM28-205ENST00000595028 SYT15Q9BQS2 421 aa16.18■□□□□ 0.18
TRIM28-205ENST00000595028 CNTNAP3Q9BZ76 1288 aa16.18■□□□□ 0.18
TRIM28-205ENST00000595028 XYLT2Q9H1B5 865 aa16.18■□□□□ 0.18
TRIM28-205ENST00000595028 ZNF334Q9HCZ1 680 aaPredicted RBP16.18■□□□□ 0.18
TRIM28-205ENST00000595028 ABCB6Q9NP58 842 aa16.18■□□□□ 0.18
TRIM28-205ENST00000595028 FRMD4BQ9Y2L6 1034 aa16.18■□□□□ 0.18
TRIM28-205ENST00000595028 A0A1W2PRU2 124 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 MAPK13O15264 365 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 PHACTR2O75167 634 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 TACC1O75410 805 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 ATICP31939 592 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 MYL6P60660 151 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 TNNC1P63316 161 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 DLG4P78352 724 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 WDR72Q3MJ13 1102 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 FAM78AQ5JUQ0 283 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 TMC2Q8TDI7 906 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 SYAP1Q96A49 352 aaPredicted RBP16.17■□□□□ 0.18
TRIM28-205ENST00000595028 ASB16Q96NS5 453 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 GSDMAQ96QA5 445 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 MMS19Q96T76 1030 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 MRPL45Q9BRJ2 306 aaKnown RBP16.17■□□□□ 0.18
TRIM28-205ENST00000595028 PI4K2AQ9BTU6 479 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 VRTNQ9H8Y1 702 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 ARHGEF3Q9NR81 526 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 CA14Q9ULX7 337 aa16.17■□□□□ 0.18
TRIM28-205ENST00000595028 COL4A2P08572 1712 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 MYBPHLA2RUH7 354 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 KRBA1A5PL33 1030 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 SMC2O95347 1197 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 FGF19O95750 216 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 C4BPAP04003 597 aaKnown RBP16.16■□□□□ 0.18
TRIM28-205ENST00000595028 NPR3P17342 541 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 RPL13P26373 211 aaKnown RBP16.16■□□□□ 0.18
TRIM28-205ENST00000595028 GABRR2P28476 465 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 PSMC1P62191 440 aaKnown RBP16.16■□□□□ 0.18
TRIM28-205ENST00000595028 GPC5P78333 572 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 NCOA4Q13772 614 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 ZNF699Q32M78 642 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 EDRF1Q3B7T1 1238 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 CFAP221Q4G0U5 840 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 TANGO2Q6ICL3 276 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 GAREM2Q75VX8 874 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 KIAA2013Q8IYS2 634 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 FLCNQ8NFG4 579 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 SPATA20Q8TB22 786 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 SMARCD2Q92925 531 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 MYLPFQ96A32 169 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 ELSPBP1Q96BH3 223 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 FUBP3Q96I24 572 aaKnown RBP eCLIP16.16■□□□□ 0.18
TRIM28-205ENST00000595028 ZSWIM3Q96MP5 696 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 GPR88Q9GZN0 384 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 SLITRK6Q9H5Y7 841 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 HOOK1Q9UJC3 728 aaKnown RBP16.16■□□□□ 0.18
TRIM28-205ENST00000595028 GTF3C4Q9UKN8 822 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 CDH9Q9ULB4 789 aa16.16■□□□□ 0.18
TRIM28-205ENST00000595028 GREB1Q4ZG55 1949 aa16.15■□□□□ 0.18
TRIM28-205ENST00000595028 KINO60870 393 aaKnown RBP16.15■□□□□ 0.18
TRIM28-205ENST00000595028 ATP2C2O75185 946 aa16.15■□□□□ 0.18
TRIM28-205ENST00000595028 AKAP3O75969 853 aa16.15■□□□□ 0.18
TRIM28-205ENST00000595028 VNN1O95497 513 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms