RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 WARSP23381 471 aaKnown RBP15.8■□□□□ 0.12
USE1-205ENST00000594724 NR2F2P24468 414 aa15.8■□□□□ 0.12
USE1-205ENST00000594724 GABRR2P28476 465 aa15.8■□□□□ 0.12
USE1-205ENST00000594724 VIPR2P41587 438 aa15.8■□□□□ 0.12
USE1-205ENST00000594724 TNNC1P63316 161 aa15.8■□□□□ 0.12
USE1-205ENST00000594724 ADAM9Q13443 819 aa15.8■□□□□ 0.12
USE1-205ENST00000594724 TAF12Q16514 161 aa15.8■□□□□ 0.12
USE1-205ENST00000594724 CWF19L1Q69YN2 538 aaKnown RBP15.8■□□□□ 0.12
USE1-205ENST00000594724 PRSS33Q8NF86 280 aa15.8■□□□□ 0.12
USE1-205ENST00000594724 ZSCAN18Q8TBC5 510 aaPredicted RBP15.8■□□□□ 0.12
USE1-205ENST00000594724 TMC2Q8TDI7 906 aa15.8■□□□□ 0.12
USE1-205ENST00000594724 SMARCD2Q92925 531 aa15.8■□□□□ 0.12
USE1-205ENST00000594724 SYAP1Q96A49 352 aaPredicted RBP15.8■□□□□ 0.12
USE1-205ENST00000594724 ELSPBP1Q96BH3 223 aa15.8■□□□□ 0.12
USE1-205ENST00000594724 ATXN3LQ9H3M9 355 aa15.8■□□□□ 0.12
USE1-205ENST00000594724 ZFP14Q9HCL3 533 aa15.8■□□□□ 0.12
USE1-205ENST00000594724 CIZ1Q9ULV3 898 aaPredicted RBP15.8■□□□□ 0.12
USE1-205ENST00000594724 NME7Q9Y5B8 376 aa15.8■□□□□ 0.12
USE1-205ENST00000594724 AKAP3O75969 853 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 CLSTN1O94985 981 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 ATICP31939 592 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 GNL1P36915 607 aaPredicted RBP15.79■□□□□ 0.12
USE1-205ENST00000594724 PRCPP42785 496 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 CLCN5P51795 746 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 AP3M2P53677 418 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 CDH8P55286 799 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 NCOA4Q13772 614 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 GRM2Q14416 872 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 NFIL3Q16649 462 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 DDR2Q16832 855 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 C1orf220Q5T0J3 134 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 FAM171BQ6P995 826 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 SPATA2LQ8IUW3 424 aaPredicted RBP15.79■□□□□ 0.12
USE1-205ENST00000594724 OR6B3Q8NGW1 331 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 SMARCE1Q969G3 411 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 FAM122AQ96E09 287 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 EEF2KMTQ96G04 330 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 TIGD1Q96MW7 591 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 GSDMAQ96QA5 445 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 GPR88Q9GZN0 384 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 KCNH6Q9H252 994 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 SNX25Q9H3E2 840 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 IL21Q9HBE4 155 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 CRTAC1Q9NQ79 661 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 RMND1Q9NWS8 449 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 CDH9Q9ULB4 789 aa15.79■□□□□ 0.12
USE1-205ENST00000594724 TACC1O75410 805 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 SMC2O95347 1197 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 STAU1O95793 577 aaKnown RBP15.78■□□□□ 0.12
USE1-205ENST00000594724 HMGA1P17096 107 aaKnown RBP15.78■□□□□ 0.12
USE1-205ENST00000594724 VAMP7P51809 220 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 CYP4F8P98187 520 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 ZCWPW2Q504Y3 356 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 SLC44A4Q53GD3 710 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 GPR158Q5T848 1215 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 ZNF658Q5TYW1 1059 aaPredicted RBP15.78■□□□□ 0.12
USE1-205ENST00000594724 ISM2Q6H9L7 571 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 VITQ6UXI7 678 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 SV2AQ7L0J3 742 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 SCN4BQ8IWT1 228 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 FAM186BQ8IYM0 893 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 MYLPFQ96A32 169 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 MKNK1Q9BUB5 465 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 TBC1D17Q9HA65 648 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 ABCB6Q9NP58 842 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 ARHGEF3Q9NR81 526 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 MAGED2Q9UNF1 606 aaPredicted RBP15.78■□□□□ 0.12
USE1-205ENST00000594724 WDFY4Q6ZS81 3184 aa15.78■□□□□ 0.12
USE1-205ENST00000594724 NCANO14594 1321 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 IKBKBO14920 756 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 MAPK13O15264 365 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 FGF19O95750 216 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 FAM163BP0C2L3 166 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 TRIM49P0CI25 452 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 TRIM49CP0CI26 452 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 AOC1P19801 751 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 RFX1P22670 979 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 BDNFP23560 247 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 RPL13P26373 211 aaKnown RBP15.77■□□□□ 0.12
USE1-205ENST00000594724 PSMC2P35998 433 aaKnown RBP15.77■□□□□ 0.12
USE1-205ENST00000594724 PLA2G5P39877 138 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 RAP1GAPP47736 663 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 RPL10AP62906 217 aaKnown RBP15.77■□□□□ 0.12
USE1-205ENST00000594724 CYP27A1Q02318 531 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 ZNF699Q32M78 642 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 ZACNQ401N2 412 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 CFAP221Q4G0U5 840 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 ZNF667Q5HYK9 610 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 SCARA5Q6ZMJ2 495 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 ARID3BQ8IVW6 561 aaPredicted RBP15.77■□□□□ 0.12
USE1-205ENST00000594724 SPATA20Q8TB22 786 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 RSPRY1Q96DX4 576 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 TRMT61BQ9BVS5 477 aaKnown RBP15.77■□□□□ 0.12
USE1-205ENST00000594724 DPEP3Q9H4B8 488 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 SMYD3Q9H7B4 428 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 MMRN2Q9H8L6 949 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 VRTNQ9H8Y1 702 aa15.77■□□□□ 0.12
USE1-205ENST00000594724 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.77■□□□□ 0.125e-8■■■■■ 188.3
USE1-205ENST00000594724 MAGEC2Q9UBF1 373 aaPredicted RBP15.77■□□□□ 0.12
USE1-205ENST00000594724 HOOK1Q9UJC3 728 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms