RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 C11orf70Q9BRQ4 267 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
VRK3-207ENST00000594092 ADAM22Q9P0K1 906 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 CTTNBP2NLQ9P2B4 639 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 DNAJB4Q9UDY4 337 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 CNOT8Q9UFF9 292 aaKnown RBP16.1■□□□□ 0.17
VRK3-207ENST00000594092 M0QYV0 167 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 MYBL1P10243 752 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 MMP8P22894 467 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 C1QBPQ07021 282 aaKnown RBP16.1■□□□□ 0.17
VRK3-207ENST00000594092 WHAMMP3Q1A5X7 153 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 MFSD5Q6N075 450 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 MMS22LQ6ZRQ5 1243 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 LRRC57Q8N9N7 239 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 LPIN3Q9BQK8 851 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 AVENQ9NQS1 362 aaPredicted RBP16.1■□□□□ 0.17
VRK3-207ENST00000594092 FAM49BQ9NUQ9 324 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 CYTH4Q9UIA0 394 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 TSPAN16Q9UKR8 245 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 TIMM13Q9Y5L4 95 aaPredicted RBP16.1■□□□□ 0.17
VRK3-207ENST00000594092 M0QZQ0 153 aa16.09■□□□□ 0.17
VRK3-207ENST00000594092 ODC1P11926 461 aa16.09■□□□□ 0.17
VRK3-207ENST00000594092 RRM1P23921 792 aa16.09■□□□□ 0.17
VRK3-207ENST00000594092 OR1G1P47890 313 aa16.09■□□□□ 0.17
VRK3-207ENST00000594092 HADHBP55084 474 aaKnown RBP16.09■□□□□ 0.17
VRK3-207ENST00000594092 ARHGAP17Q68EM7 881 aa16.09■□□□□ 0.17
VRK3-207ENST00000594092 CEP112Q8N8E3 955 aa16.09■□□□□ 0.17
VRK3-207ENST00000594092 RSPH1Q8WYR4 309 aa16.09■□□□□ 0.17
VRK3-207ENST00000594092 TNIP3Q96KP6 325 aa16.09■□□□□ 0.17
VRK3-207ENST00000594092 NUP85Q9BW27 656 aa16.09■□□□□ 0.17
VRK3-207ENST00000594092 NRDE2Q9H7Z3 1164 aa16.09■□□□□ 0.17
VRK3-207ENST00000594092 DDX43Q9NXZ2 648 aaKnown RBP16.09■□□□□ 0.17
VRK3-207ENST00000594092 PCDH10Q9P2E7 1040 aa16.09■□□□□ 0.17
VRK3-207ENST00000594092 TBKBP1A7MCY6 615 aa16.08■□□□□ 0.17
VRK3-207ENST00000594092 TMEM189-UBE2V1I3L0A0 370 aa16.08■□□□□ 0.17
VRK3-207ENST00000594092 MTA2O94776 668 aa16.08■□□□□ 0.17
VRK3-207ENST00000594092 CYP11A1P05108 521 aa16.08■□□□□ 0.17
VRK3-207ENST00000594092 GPD2P43304 727 aa16.08■□□□□ 0.17
VRK3-207ENST00000594092 LHX1P48742 406 aa16.08■□□□□ 0.17
VRK3-207ENST00000594092 GOLGA7BQ2TAP0 167 aa16.08■□□□□ 0.17
VRK3-207ENST00000594092 LIN9Q5TKA1 542 aa16.08■□□□□ 0.17
VRK3-207ENST00000594092 LLGL2Q6P1M3 1020 aa16.08■□□□□ 0.17
VRK3-207ENST00000594092 TMEM199Q8N511 208 aa16.08■□□□□ 0.17
VRK3-207ENST00000594092 B3GALNT2Q8NCR0 500 aa16.08■□□□□ 0.17
VRK3-207ENST00000594092 UBA3Q8TBC4 463 aa16.08■□□□□ 0.17
VRK3-207ENST00000594092 SUSD3Q96L08 255 aa16.08■□□□□ 0.17
VRK3-207ENST00000594092 CALR3Q96L12 384 aaKnown RBP16.08■□□□□ 0.17
VRK3-207ENST00000594092 DNAI2Q9GZS0 605 aa16.08■□□□□ 0.17
VRK3-207ENST00000594092 UVRAGQ9P2Y5 699 aa16.08■□□□□ 0.17
VRK3-207ENST00000594092 SNX12Q9UMY4 172 aa16.08■□□□□ 0.17
VRK3-207ENST00000594092 LTBP2Q14767 1821 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 ABHD14A-ACY1A0A1B0GW23 586 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 BUB1BO60566 1050 aaPredicted RBP16.08■□□□□ 0.16
VRK3-207ENST00000594092 ATP2C2O75185 946 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 UPP2O95045 317 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 FTCDO95954 541 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 PFKMP08237 780 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 PRLRP16471 622 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 ACAT1P24752 427 aaKnown RBP16.08■□□□□ 0.16
VRK3-207ENST00000594092 PSMC1P62191 440 aaKnown RBP16.08■□□□□ 0.16
VRK3-207ENST00000594092 PTPN20Q4JDL3 420 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 PKDCCQ504Y2 493 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 KIAA0319Q5VV43 1072 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 SLFN11Q7Z7L1 901 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 PHLDB2Q86SQ0 1253 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 ERICH1Q86X53 443 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 SYCE1Q8N0S2 351 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 ZNF564Q8TBZ8 553 aaPredicted RBP16.08■□□□□ 0.16
VRK3-207ENST00000594092 SPATA18Q8TC71 538 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 MRPL9Q9BYD2 267 aaKnown RBP16.08■□□□□ 0.16
VRK3-207ENST00000594092 GOLPH3Q9H4A6 298 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 HCSTQ9UBK5 93 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 PRG3Q9Y2Y8 225 aaPredicted RBP16.08■□□□□ 0.16
VRK3-207ENST00000594092 HYOU1Q9Y4L1 999 aa16.08■□□□□ 0.16
VRK3-207ENST00000594092 FNDC1Q4ZHG4 1894 aaPredicted RBP16.07■□□□□ 0.16
VRK3-207ENST00000594092 CALB1P05937 261 aa16.07■□□□□ 0.16
VRK3-207ENST00000594092 CCDC130P13994 396 aa16.07■□□□□ 0.16
VRK3-207ENST00000594092 TCP1P17987 556 aaKnown RBP16.07■□□□□ 0.16
VRK3-207ENST00000594092 PTPN1P18031 435 aaKnown RBP16.07■□□□□ 0.16
VRK3-207ENST00000594092 TTC30AQ86WT1 665 aa16.07■□□□□ 0.16
VRK3-207ENST00000594092 DSEQ9UL01 958 aa16.07■□□□□ 0.16
VRK3-207ENST00000594092 TSC2P49815 1807 aa16.07■□□□□ 0.16
VRK3-207ENST00000594092 EFCAB8A8MWE9 144 aa16.06■□□□□ 0.16
VRK3-207ENST00000594092 NRP1O14786 923 aa16.06■□□□□ 0.16
VRK3-207ENST00000594092 NCK2O43639 380 aa16.06■□□□□ 0.16
VRK3-207ENST00000594092 ACRP10323 421 aa16.06■□□□□ 0.16
VRK3-207ENST00000594092 PDCLQ13371 301 aa16.06■□□□□ 0.16
VRK3-207ENST00000594092 CCDC142Q17RM4 750 aa16.06■□□□□ 0.16
VRK3-207ENST00000594092 MEI1Q5TIA1 1274 aa16.06■□□□□ 0.16
VRK3-207ENST00000594092 PLEKHA7Q6IQ23 1121 aa16.06■□□□□ 0.16
VRK3-207ENST00000594092 DAAM2Q86T65 1068 aa16.06■□□□□ 0.16
VRK3-207ENST00000594092 METTL23Q86XA0 190 aa16.06■□□□□ 0.16
VRK3-207ENST00000594092 CPXM1Q96SM3 734 aa16.06■□□□□ 0.16
VRK3-207ENST00000594092 RTP3Q9BQQ7 232 aa16.06■□□□□ 0.16
VRK3-207ENST00000594092 SYT15Q9BQS2 421 aa16.06■□□□□ 0.16
VRK3-207ENST00000594092 HESX1Q9UBX0 185 aa16.06■□□□□ 0.16
VRK3-207ENST00000594092 PCDHB8Q9UN66 801 aa16.06■□□□□ 0.16
VRK3-207ENST00000594092 ALPK3Q96L96 1907 aa16.06■□□□□ 0.16
VRK3-207ENST00000594092 ARHGEF37A1IGU5 675 aa16.05■□□□□ 0.16
VRK3-207ENST00000594092 SRGAP2O75044 1071 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms