RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 TNIP3Q96KP6 325 aa22.05■■□□□ 1.12
PNKP-203ENST00000593946 NUP85Q9BW27 656 aa22.05■■□□□ 1.12
PNKP-203ENST00000593946 CHORDC1Q9UHD1 332 aaPredicted RBP22.05■■□□□ 1.12
PNKP-203ENST00000593946 CYTH4Q9UIA0 394 aa22.05■■□□□ 1.12
PNKP-203ENST00000593946 BUB1BO60566 1050 aaPredicted RBP22.04■■□□□ 1.12
PNKP-203ENST00000593946 CYP11A1P05108 521 aa22.04■■□□□ 1.12
PNKP-203ENST00000593946 ITGB1P05556 798 aa22.04■■□□□ 1.12
PNKP-203ENST00000593946 ODC1P11926 461 aa22.04■■□□□ 1.12
PNKP-203ENST00000593946 EN2P19622 333 aaPredicted RBP22.04■■□□□ 1.12
PNKP-203ENST00000593946 GPD2P43304 727 aa22.04■■□□□ 1.12
PNKP-203ENST00000593946 LHX1P48742 406 aa22.04■■□□□ 1.12
PNKP-203ENST00000593946 GATMP50440 423 aa22.04■■□□□ 1.12
PNKP-203ENST00000593946 C2CD6Q53TS8 623 aa22.04■■□□□ 1.12
PNKP-203ENST00000593946 LIN9Q5TKA1 542 aa22.04■■□□□ 1.12
PNKP-203ENST00000593946 FAM49BQ9NUQ9 324 aa22.04■■□□□ 1.12
PNKP-203ENST00000593946 F8W810 466 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 RIOK3O14730 519 aaKnown RBP22.03■■□□□ 1.12
PNKP-203ENST00000593946 CALB1P05937 261 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 RAG1P15918 1043 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 BRCC3P46736 316 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 PKDCCQ504Y2 493 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 MFSD5Q6N075 450 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.03■■□□□ 1.12
PNKP-203ENST00000593946 SYCE1Q8N0S2 351 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 B3GALNT2Q8NCR0 500 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 ZNF564Q8TBZ8 553 aaPredicted RBP22.03■■□□□ 1.12
PNKP-203ENST00000593946 HASPINQ8TF76 798 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 SUSD3Q96L08 255 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 FAM193BQ96PV7 902 aaPredicted RBP22.03■■□□□ 1.12
PNKP-203ENST00000593946 DNAJB4Q9UDY4 337 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 MRFAP1Q9Y605 127 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 VWA8A3KMH1 1905 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 COL4A6Q14031 1691 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 I3L4J1 428 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 FTCDO95954 541 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 PFKMP08237 780 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 CSF2RAP15509 400 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 GOLGA7BQ2TAP0 167 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 PTPN20Q4JDL3 420 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 MEI1Q5TIA1 1274 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 PLEKHA7Q6IQ23 1121 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 DAAM2Q86T65 1068 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 ERICH1Q86X53 443 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 LPIN3Q9BQK8 851 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 TLR10Q9BXR5 811 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 MRPL9Q9BYD2 267 aaKnown RBP22.03■■□□□ 1.12
PNKP-203ENST00000593946 GOLPH3Q9H4A6 298 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 NRDE2Q9H7Z3 1164 aa22.03■■□□□ 1.12
PNKP-203ENST00000593946 DDX43Q9NXZ2 648 aaKnown RBP22.03■■□□□ 1.12
PNKP-203ENST00000593946 TIMM13Q9Y5L4 95 aaPredicted RBP22.03■■□□□ 1.12
PNKP-203ENST00000593946 TUBB2AQ13885 445 aa22.02■■□□□ 1.12
PNKP-203ENST00000593946 C11orf63Q6NUN7 778 aa22.02■■□□□ 1.12
PNKP-203ENST00000593946 LLGL2Q6P1M3 1020 aa22.02■■□□□ 1.12
PNKP-203ENST00000593946 TTC30AQ86WT1 665 aa22.02■■□□□ 1.12
PNKP-203ENST00000593946 TUBB2BQ9BVA1 445 aa22.02■■□□□ 1.12
PNKP-203ENST00000593946 ABCB6Q9NP58 842 aa22.02■■□□□ 1.12
PNKP-203ENST00000593946 DSEQ9UL01 958 aa22.02■■□□□ 1.12
PNKP-203ENST00000593946 ABHD14A-ACY1A0A1B0GW23 586 aa22.01■■□□□ 1.11
PNKP-203ENST00000593946 OR1G1P47890 313 aa22.01■■□□□ 1.11
PNKP-203ENST00000593946 PDCLQ13371 301 aa22.01■■□□□ 1.11
PNKP-203ENST00000593946 UBA3Q8TBC4 463 aa22.01■■□□□ 1.11
PNKP-203ENST00000593946 CPXM1Q96SM3 734 aa22.01■■□□□ 1.11
PNKP-203ENST00000593946 CDC23Q9UJX2 597 aa22.01■■□□□ 1.11
PNKP-203ENST00000593946 SNX12Q9UMY4 172 aa22.01■■□□□ 1.11
PNKP-203ENST00000593946 SAR1BQ9Y6B6 198 aa22.01■■□□□ 1.11
PNKP-203ENST00000593946 SCINQ9Y6U3 715 aa22.01■■□□□ 1.11
PNKP-203ENST00000593946 PTPRSQ13332 1948 aa22.01■■□□□ 1.11
PNKP-203ENST00000593946 PTPRDP23468 1912 aa22.01■■□□□ 1.11
PNKP-203ENST00000593946 TCRBV5S1A1TA0A578 114 aa22■■□□□ 1.11
PNKP-203ENST00000593946 ARHGEF37A1IGU5 675 aa22■■□□□ 1.11
PNKP-203ENST00000593946 NCK2O43639 380 aa22■■□□□ 1.11
PNKP-203ENST00000593946 ATP2C2O75185 946 aa22■■□□□ 1.11
PNKP-203ENST00000593946 CCDC130P13994 396 aa22■■□□□ 1.11
PNKP-203ENST00000593946 PTPN1P18031 435 aaKnown RBP22■■□□□ 1.11
PNKP-203ENST00000593946 ACAT1P24752 427 aaKnown RBP22■■□□□ 1.11
PNKP-203ENST00000593946 PSMC1P62191 440 aaKnown RBP22■■□□□ 1.11
PNKP-203ENST00000593946 MAMLD1Q13495 774 aa22■■□□□ 1.11
PNKP-203ENST00000593946 KIAA0319Q5VV43 1072 aa22■■□□□ 1.11
PNKP-203ENST00000593946 NT5DC3Q86UY8 548 aa22■■□□□ 1.11
PNKP-203ENST00000593946 TMEM199Q8N511 208 aa22■■□□□ 1.11
PNKP-203ENST00000593946 MSANTD4Q8NCY6 345 aa22■■□□□ 1.11
PNKP-203ENST00000593946 MRPL47Q9HD33 250 aaKnown RBP22■■□□□ 1.11
PNKP-203ENST00000593946 HESX1Q9UBX0 185 aa22■■□□□ 1.11
PNKP-203ENST00000593946 STRIP2Q9ULQ0 834 aa22■■□□□ 1.11
PNKP-203ENST00000593946 TBKBP1A7MCY6 615 aa22■■□□□ 1.11
PNKP-203ENST00000593946 SETSIPP0DME0 302 aa22■■□□□ 1.11
PNKP-203ENST00000593946 PRLRP16471 622 aa22■■□□□ 1.11
PNKP-203ENST00000593946 TYMPP19971 482 aa22■■□□□ 1.11
PNKP-203ENST00000593946 GABRB2P47870 512 aa22■■□□□ 1.11
PNKP-203ENST00000593946 GSCP56915 257 aaPredicted RBP22■■□□□ 1.11
PNKP-203ENST00000593946 PHLDB2Q86SQ0 1253 aa22■■□□□ 1.11
PNKP-203ENST00000593946 METTL23Q86XA0 190 aa22■■□□□ 1.11
PNKP-203ENST00000593946 RTP3Q9BQQ7 232 aa22■■□□□ 1.11
PNKP-203ENST00000593946 SYT15Q9BQS2 421 aa22■■□□□ 1.11
PNKP-203ENST00000593946 PARVAQ9NVD7 372 aa22■■□□□ 1.11
PNKP-203ENST00000593946 PCDHB8Q9UN66 801 aa22■■□□□ 1.11
PNKP-203ENST00000593946 PRG3Q9Y2Y8 225 aaPredicted RBP22■■□□□ 1.11
PNKP-203ENST00000593946 PCSK1P29120 753 aa21.99■■□□□ 1.11
PNKP-203ENST00000593946 BCAT1P54687 386 aa21.99■■□□□ 1.11
PNKP-203ENST00000593946 CYP4A22Q5TCH4 519 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms