RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 GOLGA8JA6NMD2 632 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 FGF19O95750 216 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 ITGB3P05106 788 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 PAX3P23760 479 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 CYP2F1P24903 491 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 CDC25CP30307 473 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 PXNP49023 591 aaPredicted RBP11.49□□□□□ -0.57
USE1-203ENST00000593597 TUFMP49411 452 aaKnown RBP11.49□□□□□ -0.57
USE1-203ENST00000593597 NRLP54845 237 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 POU5F1Q01860 360 aaKnown RBP11.49□□□□□ -0.57
USE1-203ENST00000593597 LMNB2Q03252 620 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 LRRC32Q14392 662 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 SV2CQ496J9 727 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 ARHGAP15Q53QZ3 475 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 TXNDC8Q6A555 127 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 SLFN12LQ6IEE8 588 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 PRR23BQ6ZRT6 265 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 LONP2Q86WA8 852 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 GPR161Q8N6U8 529 aaKnown RBP11.49□□□□□ -0.57
USE1-203ENST00000593597 MAB21L3Q8N8X9 362 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 RASSF8Q8NHQ8 419 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 FAM200AQ8TCP9 573 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 C2orf15Q8WU43 125 aaKnown RBP11.49□□□□□ -0.57
USE1-203ENST00000593597 SLC22A12Q96S37 553 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 GKN1Q9NS71 199 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 STK17AQ9UEE5 414 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 GMEB2Q9UKD1 530 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 AGAP1Q9UPQ3 857 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 NME7Q9Y5B8 376 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 SRPRBQ9Y5M8 271 aaKnown RBP11.49□□□□□ -0.57
USE1-203ENST00000593597 CEP295Q9C0D2 2601 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 DPYSL4O14531 572 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 NOL4O94818 638 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 IL18RAPO95256 599 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 EGFP01133 1207 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 RETP07949 1114 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 HOXD13P35453 343 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 TFAMQ00059 246 aaKnown RBP11.48□□□□□ -0.57
USE1-203ENST00000593597 SIM2Q14190 667 aaPredicted RBP11.48□□□□□ -0.57
USE1-203ENST00000593597 VEPH1Q14D04 833 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 DDR2Q16832 855 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 ITPRIPL2Q3MIP1 535 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 TMEM196Q5HYL7 178 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 DGKKQ5KSL6 1271 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 LMBRD2Q68DH5 695 aaPredicted RBP11.48□□□□□ -0.57
USE1-203ENST00000593597 LIMS2Q7Z4I7 341 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 WDR5BQ86VZ2 330 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 FAM160A2Q8N612 972 aaPredicted RBP11.48□□□□□ -0.57
USE1-203ENST00000593597 KRI1Q8N9T8 703 aaKnown RBP11.48□□□□□ -0.57
USE1-203ENST00000593597 LEO1Q8WVC0 666 aaPredicted RBP11.48□□□□□ -0.57
USE1-203ENST00000593597 KBTBD7Q8WVZ9 684 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 HPS3Q969F9 1004 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 CNTNAP3BQ96NU0 1288 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 USP28Q96RU2 1077 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 CNTNAP3Q9BZ76 1288 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 MTMR12Q9C0I1 747 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 EBF3Q9H4W6 596 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 PCIF1Q9H4Z3 704 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 MRPL44Q9H9J2 332 aaKnown RBP11.48□□□□□ -0.57
USE1-203ENST00000593597 PDE11AQ9HCR9 933 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 OLFML3Q9NRN5 406 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 RXFP3Q9NSD7 469 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 SEMA4GQ9NTN9 838 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 RBAKQ9NYW8 714 aaPredicted RBP11.48□□□□□ -0.57
USE1-203ENST00000593597 CDV3Q9UKY7 258 aaKnown RBP11.48□□□□□ -0.57
USE1-203ENST00000593597 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.48□□□□□ -0.57
USE1-203ENST00000593597 PCDHB5Q9Y5E4 795 aa11.48□□□□□ -0.57
USE1-203ENST00000593597 PRR5-ARHGAP8B1AHC4 643 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 GABRDO14764 452 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 GCNT3O95395 438 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 SYT1P21579 422 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 HOXA6P31267 233 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 ABCD1P33897 745 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 ARHGAP8P85298 464 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 ZXDBP98169 803 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 PLCB2Q00722 1185 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 CEBPZQ03701 1054 aaKnown RBP11.47□□□□□ -0.57
USE1-203ENST00000593597 BFSP1Q12934 665 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 USP4Q13107 963 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 RUNX3Q13761 415 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 ZNF77Q15935 545 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 SOWAHAQ2M3V2 549 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 INTS6LQ5JSJ4 861 aaKnown RBP11.47□□□□□ -0.57
USE1-203ENST00000593597 C1orf228Q6PIY5 440 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 PRR23CQ6ZRP0 262 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 METTL23Q86XA0 190 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 DCP1BQ8IZD4 617 aaKnown RBP11.47□□□□□ -0.57
USE1-203ENST00000593597 THEM5Q8N1Q8 247 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 OR5B17Q8NGF7 314 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 ZNF560Q96MR9 790 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 ACCSQ96QU6 501 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 RTKNQ9BST9 563 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 GDAP2Q9NXN4 497 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 DDX43Q9NXZ2 648 aaKnown RBP11.47□□□□□ -0.57
USE1-203ENST00000593597 SEL1LQ9UBV2 794 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 GTF3C4Q9UKN8 822 aa11.47□□□□□ -0.57
USE1-203ENST00000593597 MAGED2Q9UNF1 606 aaPredicted RBP11.47□□□□□ -0.57
USE1-203ENST00000593597 CFAP47Q6ZTR5 3102 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.46□□□□□ -0.57
USE1-203ENST00000593597 C2orf78A6NCI8 922 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms