RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 RUNX3Q13761 415 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 PTPAQ15257 358 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 TMEM196Q5HYL7 178 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 TXNDC8Q6A555 127 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 FSTL4Q6MZW2 842 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 CEP68Q76N32 757 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 PDCL2Q8N4E4 241 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 SAAL1Q96ER3 474 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 EBF3Q9H4W6 596 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 TBC1D7Q9P0N9 293 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 L1RE1Q9UN81 338 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 MAGED2Q9UNF1 606 aaPredicted RBP17.62■□□□□ 0.41
LIG1-205ENST00000593425 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.62■□□□□ 0.41
LIG1-205ENST00000593425 KIAA1549LQ6ZVL6 1849 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 MYO16Q9Y6X6 1858 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 MYMKA6NI61 221 aa17.61■□□□□ 0.41
LIG1-205ENST00000593425 PRPF40AO75400 957 aaKnown RBP17.61■□□□□ 0.41
LIG1-205ENST00000593425 ITGB3P05106 788 aa17.61■□□□□ 0.41
LIG1-205ENST00000593425 ARSAP15289 507 aa17.61■□□□□ 0.41
LIG1-205ENST00000593425 ACAT1P24752 427 aaKnown RBP17.61■□□□□ 0.41
LIG1-205ENST00000593425 AVPR1AP37288 418 aa17.61■□□□□ 0.41
LIG1-205ENST00000593425 PXNP49023 591 aaPredicted RBP17.61■□□□□ 0.41
LIG1-205ENST00000593425 TFAMQ00059 246 aaKnown RBP17.61■□□□□ 0.41
LIG1-205ENST00000593425 POSTNQ15063 836 aa17.61■□□□□ 0.41
LIG1-205ENST00000593425 CCDC142Q17RM4 750 aa17.61■□□□□ 0.41
LIG1-205ENST00000593425 NT5DC4Q86YG4 428 aa17.61■□□□□ 0.41
LIG1-205ENST00000593425 BRSK2Q8IWQ3 736 aa17.61■□□□□ 0.41
LIG1-205ENST00000593425 C1orf127Q8N9H9 656 aa17.61■□□□□ 0.41
LIG1-205ENST00000593425 DNAJC19Q96DA6 116 aa17.61■□□□□ 0.41
LIG1-205ENST00000593425 FAM213AQ9BRX8 229 aa17.61■□□□□ 0.41
LIG1-205ENST00000593425 FGFBP2Q9BYJ0 223 aa17.61■□□□□ 0.41
LIG1-205ENST00000593425 MRPL44Q9H9J2 332 aaKnown RBP17.61■□□□□ 0.41
LIG1-205ENST00000593425 STK17AQ9UEE5 414 aa17.61■□□□□ 0.41
LIG1-205ENST00000593425 ZMYM5Q9UJ78 669 aa17.61■□□□□ 0.41
LIG1-205ENST00000593425 FBXO2Q9UK22 296 aaPredicted RBP17.61■□□□□ 0.41
LIG1-205ENST00000593425 AGAP1Q9UPQ3 857 aa17.61■□□□□ 0.41
LIG1-205ENST00000593425 VPS37CA5D8V6 355 aaPredicted RBP17.6■□□□□ 0.41
LIG1-205ENST00000593425 TULP1O00294 542 aaPredicted RBP17.6■□□□□ 0.41
LIG1-205ENST00000593425 ADRB1P08588 477 aa17.6■□□□□ 0.41
LIG1-205ENST00000593425 DDX6P26196 483 aaKnown RBP eCLIP17.6■□□□□ 0.41
LIG1-205ENST00000593425 PNPLA4P41247 253 aa17.6■□□□□ 0.41
LIG1-205ENST00000593425 CASP5P51878 434 aa17.6■□□□□ 0.41
LIG1-205ENST00000593425 TSPY1Q01534 308 aa17.6■□□□□ 0.41
LIG1-205ENST00000593425 BFSP1Q12934 665 aa17.6■□□□□ 0.41
LIG1-205ENST00000593425 PPM1JQ5JR12 505 aa17.6■□□□□ 0.41
LIG1-205ENST00000593425 L1TD1Q5T7N2 865 aaKnown RBP17.6■□□□□ 0.41
LIG1-205ENST00000593425 NAIF1Q69YI7 327 aaPredicted RBP17.6■□□□□ 0.41
LIG1-205ENST00000593425 OSTM1Q86WC4 334 aa17.6■□□□□ 0.41
LIG1-205ENST00000593425 CXorf38Q8TB03 319 aa17.6■□□□□ 0.41
LIG1-205ENST00000593425 LEO1Q8WVC0 666 aaPredicted RBP17.6■□□□□ 0.41
LIG1-205ENST00000593425 PKMYT1Q99640 499 aa17.6■□□□□ 0.41
LIG1-205ENST00000593425 KIF9Q9HAQ2 790 aa17.6■□□□□ 0.41
LIG1-205ENST00000593425 TDP1Q9NUW8 608 aa17.6■□□□□ 0.41
LIG1-205ENST00000593425 POLR3BQ9NW08 1133 aaPredicted RBP17.6■□□□□ 0.41
LIG1-205ENST00000593425 DDX43Q9NXZ2 648 aaKnown RBP17.6■□□□□ 0.41
LIG1-205ENST00000593425 ANAPC1Q9H1A4 1944 aa17.6■□□□□ 0.41
LIG1-205ENST00000593425 HELZP42694 1942 aaKnown RBP17.59■□□□□ 0.41
LIG1-205ENST00000593425 TRDMT1O14717 391 aaKnown RBP17.59■□□□□ 0.41
LIG1-205ENST00000593425 HCRTO43612 131 aa17.59■□□□□ 0.41
LIG1-205ENST00000593425 GCNT3O95395 438 aa17.59■□□□□ 0.41
LIG1-205ENST00000593425 EGFP01133 1207 aa17.59■□□□□ 0.41
LIG1-205ENST00000593425 CSH1P0DML2 217 aa17.59■□□□□ 0.41
LIG1-205ENST00000593425 CSH2P0DML3 217 aa17.59■□□□□ 0.41
LIG1-205ENST00000593425 CYP2F1P24903 491 aa17.59■□□□□ 0.41
LIG1-205ENST00000593425 NFE2Q16621 373 aaPredicted RBP17.59■□□□□ 0.41
LIG1-205ENST00000593425 DDR2Q16832 855 aa17.59■□□□□ 0.41
LIG1-205ENST00000593425 INTS6LQ5JSJ4 861 aaKnown RBP17.59■□□□□ 0.41
LIG1-205ENST00000593425 MON1AQ86VX9 555 aa17.59■□□□□ 0.41
LIG1-205ENST00000593425 MRPS31Q92665 395 aaKnown RBP17.59■□□□□ 0.41
LIG1-205ENST00000593425 CLIC6Q96NY7 704 aa17.59■□□□□ 0.41
LIG1-205ENST00000593425 ACCSQ96QU6 501 aa17.59■□□□□ 0.41
LIG1-205ENST00000593425 FBRSL1Q9HCM7 1045 aaKnown RBP17.59■□□□□ 0.41
LIG1-205ENST00000593425 RBAKQ9NYW8 714 aaPredicted RBP17.59■□□□□ 0.41
LIG1-205ENST00000593425 SEL1LQ9UBV2 794 aa17.59■□□□□ 0.41
LIG1-205ENST00000593425 CCDC39Q9UFE4 941 aa17.59■□□□□ 0.41
LIG1-205ENST00000593425 EXOC7Q9UPT5 735 aa17.59■□□□□ 0.41
LIG1-205ENST00000593425 ATG2BQ96BY7 2078 aa17.59■□□□□ 0.41
LIG1-205ENST00000593425 GOLGA8IPA6NC78 632 aa17.58■□□□□ 0.4
LIG1-205ENST00000593425 GOLGA8JA6NMD2 632 aa17.58■□□□□ 0.4
LIG1-205ENST00000593425 RNF40O75150 1001 aa17.58■□□□□ 0.4
LIG1-205ENST00000593425 NOL4O94818 638 aa17.58■□□□□ 0.4
LIG1-205ENST00000593425 GAP43P17677 238 aa17.58■□□□□ 0.4
LIG1-205ENST00000593425 GRSF1Q12849 480 aaKnown RBP eCLIP17.58■□□□□ 0.4
LIG1-205ENST00000593425 CCDC6Q16204 474 aa17.58■□□□□ 0.4
LIG1-205ENST00000593425 RRAGBQ5VZM2 374 aa17.58■□□□□ 0.4
LIG1-205ENST00000593425 FAM173BQ6P4H8 233 aa17.58■□□□□ 0.4
LIG1-205ENST00000593425 GAB3Q8WWW8 586 aa17.58■□□□□ 0.4
LIG1-205ENST00000593425 ACBD6Q9BR61 282 aa17.58■□□□□ 0.4
LIG1-205ENST00000593425 CBWD1Q9BRT8 395 aa17.58■□□□□ 0.4
LIG1-205ENST00000593425 ARRDC1-AS1Q9H2J1 176 aa17.58■□□□□ 0.4
LIG1-205ENST00000593425 GTF3C4Q9UKN8 822 aa17.58■□□□□ 0.4
LIG1-205ENST00000593425 AXIN1O15169 862 aa17.57■□□□□ 0.4
LIG1-205ENST00000593425 HUS1O60921 280 aa17.57■□□□□ 0.4
LIG1-205ENST00000593425 RPP40O75818 363 aaKnown RBP17.57■□□□□ 0.4
LIG1-205ENST00000593425 GARTP22102 1010 aa17.57■□□□□ 0.4
LIG1-205ENST00000593425 RPL10AP62906 217 aaKnown RBP17.57■□□□□ 0.4
LIG1-205ENST00000593425 MYL7Q01449 175 aa17.57■□□□□ 0.4
LIG1-205ENST00000593425 ZNF268Q14587 947 aaPredicted RBP17.57■□□□□ 0.4
LIG1-205ENST00000593425 MTF1Q14872 753 aa17.57■□□□□ 0.4
LIG1-205ENST00000593425 SF3A2Q15428 464 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms