RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 KIF3BO15066 747 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 MGEA5O60502 916 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 ZBED1O96006 694 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 HKR1P10072 659 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 ITGALP20701 1170 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 NPTX2P47972 431 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 BLOC1S1P78537 153 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 TAP2Q03519 686 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 SP5Q6BEB4 398 aaPredicted RBP6.03□□□□□ -1.44
SMAD4-216ENST00000593223 LAIR1Q6GTX8 287 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 SWSAP1Q6NVH7 229 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 LAYNQ6UX15 382 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 MICALCLQ6ZW33 695 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 CHST15Q7LFX5 561 aaPredicted RBP6.03□□□□□ -1.44
SMAD4-216ENST00000593223 CCAR1Q8IX12 1150 aaKnown RBP6.03□□□□□ -1.44
SMAD4-216ENST00000593223 ULK2Q8IYT8 1036 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 ADGRG5Q8IZF4 528 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 IL31RAQ8NI17 732 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 POC1BQ8TC44 478 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 PRRX2Q99811 253 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 TTPALQ9BTX7 342 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 TTYH3Q9C0H2 523 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 ATP6V0A4Q9HBG4 840 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 ING1Q9UK53 422 aaPredicted RBP6.03□□□□□ -1.44
SMAD4-216ENST00000593223 MED16Q9Y2X0 877 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 TMX2Q9Y320 296 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 ABCC2Q92887 1545 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 HMGB1P1B2RPK0 211 aaPredicted RBP6.02□□□□□ -1.45
SMAD4-216ENST00000593223 TBC1D4O60343 1298 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 SOAT2O75908 522 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 DNAJB5O75953 348 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 THP07101 528 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 EGR2P11161 476 aaPredicted RBP6.02□□□□□ -1.45
SMAD4-216ENST00000593223 BRAFP15056 766 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 GATA3P23771 443 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 NDUFV1P49821 464 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 FAM193AP78312 1265 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 TAP1Q03518 808 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 HLXQ14774 488 aaPredicted RBP6.02□□□□□ -1.45
SMAD4-216ENST00000593223 SF3B3Q15393 1217 aaKnown RBP6.02□□□□□ -1.45
SMAD4-216ENST00000593223 HSP90AB4PQ58FF6 505 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 CCDC181Q5TID7 509 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 LMBRD2Q68DH5 695 aaPredicted RBP6.02□□□□□ -1.45
SMAD4-216ENST00000593223 APOA5Q6Q788 366 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 MPP5Q8N3R9 675 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 SLC44A3Q8N4M1 653 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 SSH3Q8TE77 659 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 KBTBD7Q8WVZ9 684 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 LRTOMTQ8WZ04 291 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 Q96MF0 132 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 SLC46A1Q96NT5 459 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 MOGAT1Q96PD6 335 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 TRIM54Q9BYV2 358 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 C22orf23Q9BZE7 217 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 SMOC2Q9H3U7 446 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 CCDC88BA6NC98 1476 aa6.02□□□□□ -1.45
SMAD4-216ENST00000593223 A0A0B4J269 797 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 GOLIM4O00461 696 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 BTN3A1O00481 513 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 TPD52L2O43399 206 aaKnown RBP6.01□□□□□ -1.45
SMAD4-216ENST00000593223 TRIAP1O43715 76 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 RAMP2O60895 175 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 RHCEP18577 417 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 GCLCP48506 637 aaPredicted RBP6.01□□□□□ -1.45
SMAD4-216ENST00000593223 UCP3P55916 312 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 SATB1Q01826 763 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 RHDQ02161 417 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 TUBB3Q13509 450 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 IQCB1Q15051 598 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 LONRF3Q496Y0 759 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 SLC44A4Q53GD3 710 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 PPP1R32Q7Z5V6 425 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 B3GALNT2Q8NCR0 500 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 SLC30A5Q8TAD4 765 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 TTC17Q96AE7 1141 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 SUCLG2Q96I99 432 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 HEPHQ9BQS7 1158 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 AIFM2Q9BRQ8 373 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 LRRC27Q9C0I9 530 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 PCED1AQ9H1Q7 454 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 BHMT2Q9H2M3 363 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 XPR1Q9UBH6 696 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 HESX1Q9UBX0 185 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 ADAMTS12P58397 1594 aa6.01□□□□□ -1.45
SMAD4-216ENST00000593223 USP19O94966 1318 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 AKAP8O43823 692 aaKnown RBP6□□□□□ -1.45
SMAD4-216ENST00000593223 PEX1O43933 1283 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 MAP4K4O95819 1239 aaPredicted RBP6□□□□□ -1.45
SMAD4-216ENST00000593223 HRGP04196 525 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 PTMSP20962 102 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 PEX2P28328 305 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 SLC11A2P49281 568 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 SUMO3P55854 103 aaPredicted RBP6□□□□□ -1.45
SMAD4-216ENST00000593223 SCAPQ12770 1279 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 TCF15Q12870 199 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 SLC13A2Q13183 592 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 BOP1Q14137 746 aaKnown RBP6□□□□□ -1.45
SMAD4-216ENST00000593223 HECTD2Q5U5R9 776 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 Q6YL49 198 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 MRGPRGQ86SM5 289 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms