RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 GCNT4Q9P109 453 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 SIX4Q9UIU6 781 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 MYO6Q9UM54 1294 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 ATRXP46100 2492 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 FRYLO94915 3013 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 ARHGAP6O43182 974 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 CLSTN1O94985 981 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 CST3P01034 146 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-219ENST00000592927 SKILP12757 684 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 HOXB3P14651 431 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-219ENST00000592927 PON1P27169 355 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 BRCC3P46736 316 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 KLK7P49862 253 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 CCZ1BP86790 482 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 CCZ1P86791 482 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-219ENST00000592927 LRMPQ12912 555 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 NCOA4Q13772 614 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 SV2CQ496J9 727 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 CBWD6Q4V339 395 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 CBWD3Q5JTY5 395 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 CBWD5Q5RIA9 395 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 FAM171A1Q5VUB5 890 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 KIAA1841Q6NSI8 718 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 CD300LGQ6UXG3 332 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 DSTYKQ6XUX3 929 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 TMEM184AQ6ZMB5 413 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 C15orf39Q6ZRI6 1047 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 FMNL3Q8IVF7 1028 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 EHBP1Q8NDI1 1231 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 CXorf38Q8TB03 319 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 SYN2Q92777 582 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-219ENST00000592927 HPDLQ96IR7 371 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 CDCA3Q99618 268 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-219ENST00000592927 GPR62Q9BZJ7 368 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 FAM207AQ9NSI2 230 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-219ENST00000592927 ZNHIT6Q9NWK9 470 aaKnown RBP12.72□□□□□ -0.37
DDX39A-219ENST00000592927 LIMD1Q9UGP4 676 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 COQ4Q9Y3A0 265 aa12.72□□□□□ -0.37
DDX39A-219ENST00000592927 ARHGEF37A1IGU5 675 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 KPNA7A9QM74 516 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 ESPNB1AK53 854 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 I3L4J1 428 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 SPTLC1O15269 473 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 NOL4O94818 638 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 HLA-DRAP01903 254 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 SOD2P04179 222 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 SRGAP2BP0DMP2 458 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 SLC9A1P19634 815 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 SDHBP21912 280 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 ATICP31939 592 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 HNRNPH3P31942 346 aaKnown RBP12.71□□□□□ -0.37
DDX39A-219ENST00000592927 PIK3CAP42336 1068 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 AARSP49588 968 aaKnown RBP eCLIP12.71□□□□□ -0.37
DDX39A-219ENST00000592927 ERVFC1P60507 584 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 MYL6P60660 151 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 KCNC3Q14003 757 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 USP41Q3LFD5 358 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 KLHDC7AQ5VTJ3 777 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 SCARA3Q6AZY7 606 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 SMYD5Q6GMV2 418 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 LLGL2Q6P1M3 1020 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 TAS1R1Q7RTX1 841 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 TMC7Q7Z402 723 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 CEP57Q86XR8 500 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 TMTC1Q8IUR5 882 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 FBXL13Q8NEE6 735 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 RIN2Q8WYP3 895 aaPredicted RBP12.71□□□□□ -0.37
DDX39A-219ENST00000592927 SUSD3Q96L08 255 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 SENP8Q96LD8 212 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 FAM81BQ96LP2 452 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 TCF25Q9BQ70 676 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 CRACR2AQ9BSW2 395 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 HERC2P3Q9BVR0 1158 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 VN1R3Q9BXE9 311 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 IMPG2Q9BZV3 1241 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 GANQ9H2C0 597 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 POMKQ9H5K3 350 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 ENTPD7Q9NQZ7 604 aa12.71□□□□□ -0.37
DDX39A-219ENST00000592927 TRIP11Q15643 1979 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 PKD1L2Q7Z442 2459 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 PDCD11Q14690 1871 aaKnown RBP12.7□□□□□ -0.38
DDX39A-219ENST00000592927 KIAA1671Q9BY89 1806 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 DCDC2BA2VCK2 349 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 CYB561D2O14569 222 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 SYN3O14994 580 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 VNN1O95497 513 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 EFEMP2O95967 443 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 URODP06132 367 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 ADRB1P08588 477 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 ODC1P11926 461 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 UCHL3P15374 230 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 CA8P35219 290 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 GLUD2P49448 558 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 CDK17Q00537 523 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 MEA1Q16626 185 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 SGSM1Q2NKQ1 1148 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 ZNF699Q32M78 642 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 PDE12Q6L8Q7 609 aaKnown RBP12.7□□□□□ -0.38
DDX39A-219ENST00000592927 DPY19L2P1Q6NXN4 242 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 TRIM65Q6PJ69 517 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms