RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 ZNF606Q8WXB4 792 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 KCNN1Q92952 543 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 MRRFQ96E11 262 aaKnown RBP15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 TMEM121Q9BTD3 319 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 CADM1Q9BY67 442 aaKnown RBP15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 ACSS3Q9H6R3 686 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 PXMP2Q9NR77 195 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 DDX56Q9NY93 547 aaKnown RBP15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 GABBR1Q9UBS5 961 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 F8VP50 259 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 CALB1P05937 261 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 MMP10P09238 476 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 PCK1P35558 622 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 KLHL38Q2WGJ6 581 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 STYK1Q6J9G0 422 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 APLFQ8IW19 511 aaPredicted RBP15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 BANPQ8N9N5 519 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 TCP10LQ8TDR4 215 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 DNAJC9Q8WXX5 260 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 RMDN3Q96TC7 470 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 SLC38A10Q9HBR0 1119 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 RAVER2Q9HCJ3 691 aaKnown RBP15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 AGO2Q9UKV8 859 aaKnown RBP15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 E7ESA3 106 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 SGK1O00141 431 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 DKC1O60832 514 aaKnown RBP eCLIP15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 ZNF132P52740 706 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 TFDP1Q14186 410 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 TSNAXIP1Q2TAA8 658 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 C1QTNF12Q5T7M4 302 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 ANKMY2Q8IV38 441 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 PPIL6Q8IXY8 311 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 PYROXD1Q8WU10 500 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 ATP6V0A1Q93050 837 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 PTCD3Q96EY7 689 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 FAM210AQ96ND0 272 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 BTBD10Q9BSF8 475 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 EFR3BQ9Y2G0 817 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 NUB1Q9Y5A7 615 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 WDR46O15213 610 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 DNAJC6O75061 913 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 BANF1O75531 89 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 ASNSP08243 561 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 ATP4AP20648 1035 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 HMGB2P26583 209 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 SSTR1P30872 391 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 ACOT2P49753 483 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 ARL4CP56559 192 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 OGDHQ02218 1023 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 PIGHQ14442 188 aaPredicted RBP15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 LBRQ14739 615 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 SGSM1Q2NKQ1 1148 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 TXNRD3NBQ6F5E7 133 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 ANKRD23Q86SG2 305 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 UBR7Q8N806 425 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 NIPA2Q8N8Q9 360 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 NAT8LQ8N9F0 302 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 RFWD2Q8NHY2 731 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 PAFAH2Q99487 392 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 ADAM33Q9BZ11 813 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 MANSC1Q9H8J5 431 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 STOML1Q9UBI4 398 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 ZNRF3Q9ULT6 936 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 ZNF541Q9H0D2 1346 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 TESPA1A2RU30 521 aaPredicted RBP15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 DPPA5A6NC42 116 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 H0Y3Z8 333 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 IFNB1P01574 187 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 SEPT7Q16181 437 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 SPDYE2Q495Y8 402 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 KHDC1Q4VXA5 237 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 PPP1R15BQ5SWA1 713 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 CDAN1Q8IWY9 1227 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 DCAKDQ8WVC6 231 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 CPT1BQ92523 772 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 TRIM55Q9BYV6 548 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 HOMER2Q9NSB8 354 aa15.61■□□□□ 0.09
SMARCA4-219ENST00000592604 PSME4Q14997 1843 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 TGDSO95455 350 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 TSHRP16473 764 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 PLCB3Q01970 1234 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 TAP1Q03518 808 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 EFTUD2Q15029 972 aaKnown RBP eCLIP15.6■□□□□ 0.097e-7■■■■■ 38.1
SMARCA4-219ENST00000592604 MSS51Q4VC12 460 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 FNBP1LQ5T0N5 605 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 FKBP1CQ5VVH2 108 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 XRRA1Q6P2D8 792 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 C3orf62Q6ZUJ4 267 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 HAUS1Q96CS2 278 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 FRMD8P1Q9BZ68 369 aaPredicted RBP15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 HAPLN2Q9GZV7 340 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 POLR3FQ9H1D9 316 aaPredicted RBP15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 GOLGA8SH3BPF8 625 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 GOLGA8MH3BSY2 632 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 GSC2O15499 205 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 HAUS5O94927 633 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 LSM8O95777 96 aaKnown RBP15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 PIGRP01833 764 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 DHRS4L1P0CG22 281 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 CTCFP49711 727 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms