RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 TM6SF1Q9BZW5 370 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 GLT8D2Q9H1C3 349 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 MBNL3Q9NUK0 354 aaKnown RBP8.46□□□□□ -1.06
VMP1-213ENST00000591877 VPS54Q9P1Q0 977 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 TUBE1Q9UJT0 475 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 MTCH2Q9Y6C9 303 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 TTC28Q96AY4 2481 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 VCANP13611 3396 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 COL4A6Q14031 1691 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 RALGAPA2Q2PPJ7 1873 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 TCF20Q9UGU0 1960 aaKnown RBP8.45□□□□□ -1.06
VMP1-213ENST00000591877 BLACEA4D250 179 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 H0Y8X5 98 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 DDX39AO00148 427 aaKnown RBP8.45□□□□□ -1.06
VMP1-213ENST00000591877 AURKAO14965 403 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 GPR39O43194 453 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 DTNBO60941 627 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 LRRN2O75325 713 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 JMJD7P0C870 316 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 CIITAP33076 1130 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 NOP2P46087 812 aaKnown RBP8.45□□□□□ -1.06
VMP1-213ENST00000591877 STAT5BP51692 787 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 SCRN1Q12765 414 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 STRN3Q13033 797 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 LPIN1Q14693 890 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 NPY5RQ15761 445 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 ZCCHC8Q6NZY4 707 aaKnown RBP8.45□□□□□ -1.06
VMP1-213ENST00000591877 TAF2Q6P1X5 1199 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 LILRA6Q6PI73 481 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 USP53Q70EK8 1073 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 FAM214BQ7L5A3 538 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 PLPPR4Q7Z2D5 763 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 CCDC60Q8IWA6 550 aaPredicted RBP8.45□□□□□ -1.06
VMP1-213ENST00000591877 MYOCDQ8IZQ8 938 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 ZNF655Q8N720 491 aaPredicted RBP8.45□□□□□ -1.06
VMP1-213ENST00000591877 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.45□□□□□ -1.06
VMP1-213ENST00000591877 SEPT8Q92599 483 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 TOP1MTQ969P6 601 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 LENG9Q96B70 501 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 ZNF274Q96GC6 653 aaPredicted RBP8.45□□□□□ -1.06
VMP1-213ENST00000591877 SDF4Q9BRK5 362 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 GPR62Q9BZJ7 368 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 C6orf50Q9HD87 102 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 BACE2Q9Y5Z0 518 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 CYP46A1Q9Y6A2 500 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 TTC3P53804 2025 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 BDP1A6H8Y1 2624 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 KIAA1671Q9BY89 1806 aa8.45□□□□□ -1.06
VMP1-213ENST00000591877 RRN3P2A6NIE6 340 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 IPO5O00410 1097 aaKnown RBP8.44□□□□□ -1.06
VMP1-213ENST00000591877 CRTAMO95727 393 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 AMHP03971 560 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 GHRP10912 638 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 GNA11P29992 359 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 CD96P40200 585 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 ERVK-21P61565 698 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 STK3Q13188 491 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 PCBP1Q15365 356 aaKnown RBP eCLIP8.44□□□□□ -1.06
VMP1-213ENST00000591877 SEPT7Q16181 437 aaKnown RBP8.44□□□□□ -1.06
VMP1-213ENST00000591877 FBXO47Q5MNV8 452 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 DENND5AQ6IQ26 1287 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 OGFOD3Q6PK18 319 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 SPATS2Q86XZ4 545 aaKnown RBP8.44□□□□□ -1.06
VMP1-213ENST00000591877 OR2W6PQ8NHA6 318 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 GDPD5Q8WTR4 605 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 CCDC12Q8WUD4 166 aaPredicted RBP8.44□□□□□ -1.06
VMP1-213ENST00000591877 LINC01599Q8WXQ3 324 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 C8orf48Q96LL4 319 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 AIFM3Q96NN9 605 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 TTC1Q99614 292 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 C17orf80Q9BSJ5 609 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 ZNF577Q9BSK1 485 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 HDAC8Q9BY41 377 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 KRTAP17-1Q9BYP8 105 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 IFIH1Q9BYX4 1025 aaKnown RBP8.44□□□□□ -1.06
VMP1-213ENST00000591877 AZI2Q9H6S1 392 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 AGO3Q9H9G7 860 aaKnown RBP8.44□□□□□ -1.06
VMP1-213ENST00000591877 SH3GLB2Q9NR46 395 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 GPR27Q9NS67 375 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 PDRG1Q9NUG6 133 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 APOBEC2Q9Y235 224 aaKnown RBP8.44□□□□□ -1.06
VMP1-213ENST00000591877 CDY2AQ9Y6F7 541 aa8.44□□□□□ -1.06
VMP1-213ENST00000591877 BRWD1Q9NSI6 2320 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 SMIM35A0A1B0GVV1 85 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 MSH4O15457 936 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 RASGRP1O95267 797 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 LINC00271P0C7V0 271 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 BPIP17213 487 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 KLRC1P26715 233 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 CFPP27918 469 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 CTSKP43235 329 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 GPR85P60893 370 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 MRPS6P82932 125 aaKnown RBP8.43□□□□□ -1.06
VMP1-213ENST00000591877 RBM10P98175 930 aaKnown RBP8.43□□□□□ -1.06
VMP1-213ENST00000591877 AKAP17AQ02040 695 aaKnown RBP8.43□□□□□ -1.06
VMP1-213ENST00000591877 TMEM62Q0P6H9 643 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 KCNAB2Q13303 367 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 STAT4Q14765 748 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 PRSS53Q2L4Q9 553 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 PRR16Q569H4 304 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms