RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CREBRFQ8IUR6 639 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 UBALD2Q8IYN6 164 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 HS6ST3Q8IZP7 471 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 TRIML1Q8N9V2 468 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 NXPE3Q969Y0 559 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 MRPL45Q9BRJ2 306 aaKnown RBP10.77□□□□□ -0.69
BRCA1-227ENST00000591849 MED10Q9BTT4 135 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 NUP62CLQ9H1M0 184 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 KCNH6Q9H252 994 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 CLSTN2Q9H4D0 955 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 KCNK12Q9HB15 430 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 METTL14Q9HCE5 456 aaKnown RBP10.77□□□□□ -0.69
BRCA1-227ENST00000591849 TMEM8AQ9HCN3 771 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.77□□□□□ -0.694e-6■■■■■ 85.3
BRCA1-227ENST00000591849 CEP72Q9P209 647 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 ARMCX3Q9UH62 379 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-227ENST00000591849 FBXL21Q9UKT6 434 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 CTNND2Q9UQB3 1225 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 TECTAO75443 2155 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 MYBPHLA2RUH7 354 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 PPP1R3GB7ZBB8 358 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 HCRTO43612 131 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 N4BP1O75113 896 aaKnown RBP10.76□□□□□ -0.69
BRCA1-227ENST00000591849 ATP2C2O75185 946 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 VNN1O95497 513 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 VNN2O95498 520 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 PTPN1P18031 435 aaKnown RBP10.76□□□□□ -0.69
BRCA1-227ENST00000591849 RFX1P22670 979 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 LMO2P25791 158 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 ANXA13P27216 316 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 GRIK1P39086 918 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 MXI1P50539 228 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 PMS1P54277 932 aaKnown RBP10.76□□□□□ -0.69
BRCA1-227ENST00000591849 PSMC1P62191 440 aaKnown RBP10.76□□□□□ -0.69
BRCA1-227ENST00000591849 PAK1Q13153 545 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 ARHGAP15Q53QZ3 475 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 MDH1BQ5I0G3 518 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 KRT39Q6A163 491 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 TRIM67Q6ZTA4 783 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 FILIP1Q7Z7B0 1213 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 TTC9BQ8N6N2 239 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 ST13P5Q8NFI4 369 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-227ENST00000591849 RSAD2Q8WXG1 361 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 CEP63Q96MT8 703 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 LPIN3Q9BQK8 851 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 GZF1Q9H116 711 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-227ENST00000591849 XYLT2Q9H1B5 865 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 CRISPLD1Q9H336 500 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 ATXN3LQ9H3M9 355 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 AVENQ9NQS1 362 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-227ENST00000591849 TMLHEQ9NVH6 421 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 GDE1Q9NZC3 331 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 MAGED2Q9UNF1 606 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-227ENST00000591849 ZDBF2Q9HCK1 2354 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 ATP8B3O60423 1300 aa10.76□□□□□ -0.69
BRCA1-227ENST00000591849 TMEM221A6NGB7 291 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 M0R296 226 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 STK25O00506 426 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 DPYSL4O14531 572 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 GNA14O95837 355 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 CSH1P0DML2 217 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 CSH2P0DML3 217 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 CD44P16070 742 aaKnown RBP10.75□□□□□ -0.69
BRCA1-227ENST00000591849 GJA1P17302 382 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 CEBPBP17676 345 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 CYP2F1P24903 491 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 GABRR2P28476 465 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 RAP1GAPP47736 663 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 CDH8P55286 799 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 PPP3CAQ08209 521 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 SIGLEC14Q08ET2 396 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 CETN1Q12798 172 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 DDR2Q16832 855 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 SLC5A9Q2M3M2 681 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 CLEC17AQ6ZS10 378 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 NPAS3Q8IXF0 933 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 SLC44A3Q8N4M1 653 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 GPR152Q8TDT2 470 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 TAS1R2Q8TE23 839 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 KBTBD7Q8WVZ9 684 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 PSMG2Q969U7 264 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 MYLPFQ96A32 169 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 PBXIP1Q96AQ6 731 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 ELMO3Q96BJ8 720 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 TCEAL4Q96EI5 215 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 FUBP3Q96I24 572 aaKnown RBP eCLIP10.75□□□□□ -0.69
BRCA1-227ENST00000591849 TNIP3Q96KP6 325 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 SRRTQ9BXP5 876 aaKnown RBP10.75□□□□□ -0.69
BRCA1-227ENST00000591849 GPR88Q9GZN0 384 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 MFSD1Q9H3U5 465 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 SMYD3Q9H7B4 428 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 VRTNQ9H8Y1 702 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 ABCB6Q9NP58 842 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 LMBRD1Q9NUN5 540 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 NUMBLQ9Y6R0 609 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 VWA8A3KMH1 1905 aa10.75□□□□□ -0.69
BRCA1-227ENST00000591849 PLXNA3P51805 1871 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 A0A1W2PRU2 124 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 MICAL2O94851 1124 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 ASS1P00966 412 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms