RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 RMDN1Q96DB5 314 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 ATXN3LQ9H3M9 355 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 SLITRK6Q9H5Y7 841 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 TASP1Q9H6P5 420 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 C8orf33Q9H7E9 229 aaPredicted RBP11.23□□□□□ -0.61
VPS4B-207ENST00000591519 OLFML3Q9NRN5 406 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 DLL3Q9NYJ7 618 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 ZMYM5Q9UJ78 669 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 NDRG2Q9UN36 371 aaKnown RBP11.23□□□□□ -0.61
VPS4B-207ENST00000591519 EXOC7Q9UPT5 735 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 CACNA1AO00555 2505 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 FRMD3A2A2Y4 597 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 MYBPHLA2RUH7 354 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 SOBPA7XYQ1 873 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 LDHAP00338 332 aaKnown RBP11.22□□□□□ -0.61
VPS4B-207ENST00000591519 HAPLN1P10915 354 aaPredicted RBP11.22□□□□□ -0.61
VPS4B-207ENST00000591519 CCNE1P24864 410 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 GABRR2P28476 465 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 PNPLA4P41247 253 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 CCR3P51677 355 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 KCNA1Q09470 495 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 PUM1Q14671 1186 aaKnown RBP eCLIP11.22□□□□□ -0.61
VPS4B-207ENST00000591519 PPP2R5DQ14738 602 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 SLC39A12Q504Y0 691 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 STXBP5Q5T5C0 1151 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 WSCD1Q658N2 575 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 TSSK4Q6SA08 328 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 SV2BQ7L1I2 683 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 TICRRQ7Z2Z1 1910 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 RALGPS2Q86X27 583 aaPredicted RBP11.22□□□□□ -0.61
VPS4B-207ENST00000591519 YAF2Q8IY57 180 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 EFCAB13Q8IY85 973 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 SPEM1Q8N4L4 309 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 SPPL2BQ8TCT7 592 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 CSGALNACT1Q8TDX6 532 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 ACCSQ96QU6 501 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 PYM1Q9BRP8 204 aaKnown RBP11.22□□□□□ -0.61
VPS4B-207ENST00000591519 IKZF4Q9H2S9 585 aa11.22□□□□□ -0.61
VPS4B-207ENST00000591519 MRPL44Q9H9J2 332 aaKnown RBP11.22□□□□□ -0.61
VPS4B-207ENST00000591519 SOAT2O75908 522 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 PAPSS2O95340 614 aaPredicted RBP11.21□□□□□ -0.61
VPS4B-207ENST00000591519 ATF6P18850 670 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 GARTP22102 1010 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 TGM1P22735 817 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 CDC25CP30307 473 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 HOXA6P31267 233 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 CXCL12P48061 93 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 PLCB2Q00722 1185 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 ALCAMQ13740 583 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 PKP1Q13835 747 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 GAS6Q14393 721 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 VEPH1Q14D04 833 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 SLC39A14Q15043 492 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 MGAT5BQ3V5L5 792 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 SV2CQ496J9 727 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 ARHGAP15Q53QZ3 475 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 DGKKQ5KSL6 1271 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 L1TD1Q5T7N2 865 aaKnown RBP11.21□□□□□ -0.61
VPS4B-207ENST00000591519 GPR158Q5T848 1215 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 ZNF787Q6DD87 383 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 CCDC73Q6ZRK6 1079 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 DCP1BQ8IZD4 617 aaKnown RBP11.21□□□□□ -0.61
VPS4B-207ENST00000591519 CELF5Q8N6W0 485 aaKnown RBP11.21□□□□□ -0.61
VPS4B-207ENST00000591519 CXorf38Q8TB03 319 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 BPIFB1Q8TDL5 484 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 CACTINQ8WUQ7 758 aaKnown RBP11.21□□□□□ -0.61
VPS4B-207ENST00000591519 CLIC6Q96NY7 704 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 LPIN3Q9BQK8 851 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 ACBD6Q9BR61 282 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 SLC46A2Q9BY10 475 aa11.21□□□□□ -0.61
VPS4B-207ENST00000591519 FRYLO94915 3013 aa11.21□□□□□ -0.62
VPS4B-207ENST00000591519 SPECC1L-ADORA2AF8WAN1 911 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 F11P03951 625 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 HMGA1P17096 107 aaKnown RBP11.2□□□□□ -0.62
VPS4B-207ENST00000591519 SDHBP21912 280 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 CTHP32929 405 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 TXLNAP40222 546 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 KPNA1P52294 538 aaPredicted RBP11.2□□□□□ -0.62
VPS4B-207ENST00000591519 WNT7BP56706 349 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 LRRC32Q14392 662 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 WDR44Q5JSH3 913 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 TMEM150AQ86TG1 271 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 GPIHBP1Q8IV16 184 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 BRSK2Q8IWQ3 736 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 SYNPOQ8N3V7 929 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 LRRC52Q8N7C0 313 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 C1orf127Q8N9H9 656 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 SPATA18Q8TC71 538 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 LEO1Q8WVC0 666 aaPredicted RBP11.2□□□□□ -0.62
VPS4B-207ENST00000591519 SECISBP2LQ93073 1101 aaKnown RBP11.2□□□□□ -0.62
VPS4B-207ENST00000591519 ZNF560Q96MR9 790 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 SEPT5Q99719 369 aaPredicted RBP11.2□□□□□ -0.62
VPS4B-207ENST00000591519 HINFPQ9BQA5 517 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 FAM213AQ9BRX8 229 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 TMEM206Q9H813 350 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 GDAP2Q9NXN4 497 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 NCDNQ9UBB6 729 aa11.2□□□□□ -0.62
VPS4B-207ENST00000591519 SMG5Q9UPR3 1016 aaKnown RBP11.2□□□□□ -0.62
VPS4B-207ENST00000591519 NUP210Q8TEM1 1887 aaPredicted RBP11.2□□□□□ -0.62
VPS4B-207ENST00000591519 TSC2P49815 1807 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms