RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 PI4K2AQ9BTU6 479 aa16.95■□□□□ 0.3
CIRBP-230ENST00000591055 GKN1Q9NS71 199 aa16.95■□□□□ 0.3
CIRBP-230ENST00000591055 TMLHEQ9NVH6 421 aa16.95■□□□□ 0.3
CIRBP-230ENST00000591055 DENND4CQ5VZ89 1909 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 HUS1O60921 280 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 LDHAP00338 332 aaKnown RBP16.94■□□□□ 0.3
CIRBP-230ENST00000591055 F11P03951 625 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 CSH1P0DML2 217 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 CSH2P0DML3 217 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 HMGA1P17096 107 aaKnown RBP16.94■□□□□ 0.3
CIRBP-230ENST00000591055 GARTP22102 1010 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 WNT7BP56706 349 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 NLRP12P59046 1061 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 CEBPZQ03701 1054 aaKnown RBP16.94■□□□□ 0.3
CIRBP-230ENST00000591055 BFSP1Q12934 665 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 RESTQ13127 1097 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 SRSF5Q13243 272 aaKnown RBP16.94■□□□□ 0.3
CIRBP-230ENST00000591055 FAM173BQ6P4H8 233 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 CCDC73Q6ZRK6 1079 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 TMEM150AQ86TG1 271 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 C1orf127Q8N9H9 656 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 ACBD6Q9BR61 282 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 RTKNQ9BST9 563 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 OLFML3Q9NRN5 406 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 C2orf42Q9NWW7 574 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 RBAKQ9NYW8 714 aaPredicted RBP16.94■□□□□ 0.3
CIRBP-230ENST00000591055 L1RE1Q9UN81 338 aa16.94■□□□□ 0.3
CIRBP-230ENST00000591055 MAGED2Q9UNF1 606 aaPredicted RBP16.94■□□□□ 0.3
CIRBP-230ENST00000591055 RALGAPA1Q6GYQ0 2036 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 GOLGA8IPA6NC78 632 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 GOLGA8JA6NMD2 632 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 LRP3O75074 770 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 STAT6P42226 847 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 GPR15P49685 360 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 CASP5P51878 434 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 MYL7Q01449 175 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 ALCAMQ13740 583 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 RUNX3Q13761 415 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 TXNDC8Q6A555 127 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.93■□□□□ 0.3
CIRBP-230ENST00000591055 TMEM86AQ8N2M4 240 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 CSGALNACT2Q8N6G5 542 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 LRRC52Q8N7C0 313 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 NOC3LQ8WTT2 800 aaKnown RBP16.93■□□□□ 0.3
CIRBP-230ENST00000591055 LEO1Q8WVC0 666 aaPredicted RBP16.93■□□□□ 0.3
CIRBP-230ENST00000591055 MRPS31Q92665 395 aaKnown RBP16.93■□□□□ 0.3
CIRBP-230ENST00000591055 USP13Q92995 863 aaPredicted RBP16.93■□□□□ 0.3
CIRBP-230ENST00000591055 FAM83CQ9BQN1 747 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 PANK2Q9BZ23 570 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 KIF9Q9HAQ2 790 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 TDP1Q9NUW8 608 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 DDX43Q9NXZ2 648 aaKnown RBP16.93■□□□□ 0.3
CIRBP-230ENST00000591055 ITGA11Q9UKX5 1188 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 CCL26Q9Y258 94 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 EPG5Q9HCE0 2579 aa16.93■□□□□ 0.3
CIRBP-230ENST00000591055 ACACBO00763 2458 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 ATG2BQ96BY7 2078 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 SOBPA7XYQ1 873 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 EXTL3O43909 919 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 KRT19P08727 400 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 SYT1P21579 422 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 ACAT1P24752 427 aaKnown RBP16.92■□□□□ 0.3
CIRBP-230ENST00000591055 HOXA6P31267 233 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 RPL10AP62906 217 aaKnown RBP16.92■□□□□ 0.3
CIRBP-230ENST00000591055 DDR2Q16832 855 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 INTS6LQ5JSJ4 861 aaKnown RBP16.92■□□□□ 0.3
CIRBP-230ENST00000591055 SDHAF4Q5VUM1 108 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 CC2D1AQ6P1N0 951 aaPredicted RBP16.92■□□□□ 0.3
CIRBP-230ENST00000591055 CEP68Q76N32 757 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 MON1AQ86VX9 555 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 WDR5BQ86VZ2 330 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 STKLD1Q8NE28 680 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 CBWD1Q9BRT8 395 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 EBF3Q9H4W6 596 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 PCIF1Q9H4Z3 704 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 ABCB6Q9NP58 842 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 HPS4Q9NQG7 708 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 PANK4Q9NVE7 773 aa16.92■□□□□ 0.3
CIRBP-230ENST00000591055 UXTQ9UBK9 157 aaPredicted RBP16.92■□□□□ 0.3
CIRBP-230ENST00000591055 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.92■□□□□ 0.3
CIRBP-230ENST00000591055 FRMD3A2A2Y4 597 aa16.91■□□□□ 0.3
CIRBP-230ENST00000591055 DCDC2BA2VCK2 349 aa16.91■□□□□ 0.3
CIRBP-230ENST00000591055 CYP2F1P24903 491 aa16.91■□□□□ 0.3
CIRBP-230ENST00000591055 RBP5P82980 135 aa16.91■□□□□ 0.3
CIRBP-230ENST00000591055 GRSF1Q12849 480 aaKnown RBP eCLIP16.91■□□□□ 0.32e-8■■□□□ 12.5
CIRBP-230ENST00000591055 TRIM68Q6AZZ1 485 aa16.91■□□□□ 0.3
CIRBP-230ENST00000591055 FAM84AQ96KN4 292 aa16.91■□□□□ 0.3
CIRBP-230ENST00000591055 FGFBP2Q9BYJ0 223 aa16.91■□□□□ 0.3
CIRBP-230ENST00000591055 TMEM206Q9H813 350 aa16.91■□□□□ 0.3
CIRBP-230ENST00000591055 PDE11AQ9HCR9 933 aa16.91■□□□□ 0.3
CIRBP-230ENST00000591055 SEMA4GQ9NTN9 838 aa16.91■□□□□ 0.3
CIRBP-230ENST00000591055 GDAP2Q9NXN4 497 aa16.91■□□□□ 0.3
CIRBP-230ENST00000591055 GTF3C4Q9UKN8 822 aa16.91■□□□□ 0.3
CIRBP-230ENST00000591055 R3HCC1Q9Y3T6 440 aaKnown RBP16.91■□□□□ 0.3
CIRBP-230ENST00000591055 SNX9Q9Y5X1 595 aa16.91■□□□□ 0.3
CIRBP-230ENST00000591055 CNOT1A5YKK6 2376 aaKnown RBP16.91■□□□□ 0.3
CIRBP-230ENST00000591055 OBSL1O75147 1896 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 SPAG17Q6Q759 2223 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 TRDMT1O14717 391 aaKnown RBP16.9■□□□□ 0.3
CIRBP-230ENST00000591055 NOL4O94818 638 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms