RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 EXTL3O43909 919 aa23.41■■□□□ 1.34
DDX39A-215ENST00000590696 PRPF6O94906 941 aaKnown RBP23.41■■□□□ 1.34
DDX39A-215ENST00000590696 NLRP12P59046 1061 aa23.41■■□□□ 1.34
DDX39A-215ENST00000590696 DMWDQ09019 674 aa23.41■■□□□ 1.34
DDX39A-215ENST00000590696 BFSP1Q12934 665 aa23.41■■□□□ 1.34
DDX39A-215ENST00000590696 NFE2Q16621 373 aaPredicted RBP23.41■■□□□ 1.34
DDX39A-215ENST00000590696 ITPRIPL2Q3MIP1 535 aa23.41■■□□□ 1.34
DDX39A-215ENST00000590696 LRRC52Q8N7C0 313 aa23.41■■□□□ 1.34
DDX39A-215ENST00000590696 STKLD1Q8NE28 680 aa23.41■■□□□ 1.34
DDX39A-215ENST00000590696 ACBD6Q9BR61 282 aa23.41■■□□□ 1.34
DDX39A-215ENST00000590696 GKN1Q9NS71 199 aa23.41■■□□□ 1.34
DDX39A-215ENST00000590696 DDX43Q9NXZ2 648 aaKnown RBP23.41■■□□□ 1.34
DDX39A-215ENST00000590696 USP18Q9UMW8 372 aa23.41■■□□□ 1.34
DDX39A-215ENST00000590696 MAGED2Q9UNF1 606 aaPredicted RBP23.41■■□□□ 1.34
DDX39A-215ENST00000590696 MTMR6Q9Y217 621 aa23.41■■□□□ 1.34
DDX39A-215ENST00000590696 MORC2Q9Y6X9 1032 aaPredicted RBP23.41■■□□□ 1.34
DDX39A-215ENST00000590696 CHURC1-FNTBB4DL54 471 aa23.4■■□□□ 1.34
DDX39A-215ENST00000590696 KRT19P08727 400 aa23.4■■□□□ 1.34
DDX39A-215ENST00000590696 CSH1P0DML2 217 aa23.4■■□□□ 1.34
DDX39A-215ENST00000590696 CSH2P0DML3 217 aa23.4■■□□□ 1.34
DDX39A-215ENST00000590696 TGM1P22735 817 aa23.4■■□□□ 1.34
DDX39A-215ENST00000590696 ACAT1P24752 427 aaKnown RBP23.4■■□□□ 1.34
DDX39A-215ENST00000590696 AVPR1AP37288 418 aa23.4■■□□□ 1.34
DDX39A-215ENST00000590696 FNTBP49356 437 aa23.4■■□□□ 1.34
DDX39A-215ENST00000590696 SDHAF4Q5VUM1 108 aa23.4■■□□□ 1.34
DDX39A-215ENST00000590696 PRR23BQ6ZRT6 265 aa23.4■■□□□ 1.34
DDX39A-215ENST00000590696 TMEM86AQ8N2M4 240 aa23.4■■□□□ 1.34
DDX39A-215ENST00000590696 PDILTQ8N807 584 aa23.4■■□□□ 1.34
DDX39A-215ENST00000590696 CXorf38Q8TB03 319 aa23.4■■□□□ 1.34
DDX39A-215ENST00000590696 TMEM206Q9H813 350 aa23.4■■□□□ 1.34
DDX39A-215ENST00000590696 PDE11AQ9HCR9 933 aa23.4■■□□□ 1.34
DDX39A-215ENST00000590696 FOXD4L1Q9NU39 408 aa23.4■■□□□ 1.34
DDX39A-215ENST00000590696 ITGA11Q9UKX5 1188 aa23.4■■□□□ 1.34
DDX39A-215ENST00000590696 CACNA1AO00555 2505 aa23.4■■□□□ 1.34
DDX39A-215ENST00000590696 KIF26AQ9ULI4 1882 aaPredicted RBP23.39■■□□□ 1.34
DDX39A-215ENST00000590696 K7ESF4 209 aa23.39■■□□□ 1.33
DDX39A-215ENST00000590696 PAPSS2O95340 614 aaPredicted RBP23.39■■□□□ 1.33
DDX39A-215ENST00000590696 DDX6P26196 483 aaKnown RBP eCLIP23.39■■□□□ 1.33
DDX39A-215ENST00000590696 MYL7Q01449 175 aa23.39■■□□□ 1.33
DDX39A-215ENST00000590696 CCINQ13939 588 aa23.39■■□□□ 1.33
DDX39A-215ENST00000590696 DDR2Q16832 855 aa23.39■■□□□ 1.33
DDX39A-215ENST00000590696 INTS6LQ5JSJ4 861 aaKnown RBP23.39■■□□□ 1.33
DDX39A-215ENST00000590696 TXNDC8Q6A555 127 aa23.39■■□□□ 1.33
DDX39A-215ENST00000590696 LAIR1Q6GTX8 287 aa23.39■■□□□ 1.33
DDX39A-215ENST00000590696 CCDC65Q8IXS2 484 aa23.39■■□□□ 1.33
DDX39A-215ENST00000590696 GPD1LQ8N335 351 aa23.39■■□□□ 1.33
DDX39A-215ENST00000590696 LEO1Q8WVC0 666 aaPredicted RBP23.39■■□□□ 1.33
DDX39A-215ENST00000590696 USP13Q92995 863 aaPredicted RBP23.39■■□□□ 1.33
DDX39A-215ENST00000590696 INTS4Q96HW7 963 aaKnown RBP23.39■■□□□ 1.33
DDX39A-215ENST00000590696 ZSCAN16Q9H4T2 348 aaPredicted RBP23.39■■□□□ 1.33
DDX39A-215ENST00000590696 PARD6AQ9NPB6 346 aa23.39■■□□□ 1.33
DDX39A-215ENST00000590696 C2orf42Q9NWW7 574 aa23.39■■□□□ 1.33
DDX39A-215ENST00000590696 GDAP2Q9NXN4 497 aa23.39■■□□□ 1.33
DDX39A-215ENST00000590696 GTF3C4Q9UKN8 822 aa23.39■■□□□ 1.33
DDX39A-215ENST00000590696 CCL26Q9Y258 94 aa23.39■■□□□ 1.33
DDX39A-215ENST00000590696 SNX9Q9Y5X1 595 aa23.39■■□□□ 1.33
DDX39A-215ENST00000590696 HRO43593 1189 aa23.38■■□□□ 1.33
DDX39A-215ENST00000590696 TMEM191BP0C7N4 346 aa23.38■■□□□ 1.33
DDX39A-215ENST00000590696 SDHBP21912 280 aa23.38■■□□□ 1.33
DDX39A-215ENST00000590696 CYP2F1P24903 491 aa23.38■■□□□ 1.33
DDX39A-215ENST00000590696 RBP5P82980 135 aa23.38■■□□□ 1.33
DDX39A-215ENST00000590696 SIM2Q14190 667 aaPredicted RBP23.38■■□□□ 1.33
DDX39A-215ENST00000590696 OSTM1Q86WC4 334 aa23.38■■□□□ 1.33
DDX39A-215ENST00000590696 SYNPOQ8N3V7 929 aa23.38■■□□□ 1.33
DDX39A-215ENST00000590696 MRPS31Q92665 395 aaKnown RBP23.38■■□□□ 1.33
DDX39A-215ENST00000590696 FAM83CQ9BQN1 747 aa23.38■■□□□ 1.33
DDX39A-215ENST00000590696 MTMR12Q9C0I1 747 aa23.38■■□□□ 1.33
DDX39A-215ENST00000590696 TDP1Q9NUW8 608 aa23.38■■□□□ 1.33
DDX39A-215ENST00000590696 SIX4Q9UIU6 781 aa23.38■■□□□ 1.33
DDX39A-215ENST00000590696 DENND4CQ5VZ89 1909 aa23.37■■□□□ 1.33
DDX39A-215ENST00000590696 PRR5-ARHGAP8B1AHC4 643 aa23.37■■□□□ 1.33
DDX39A-215ENST00000590696 RPL10AP62906 217 aaKnown RBP23.37■■□□□ 1.33
DDX39A-215ENST00000590696 ARHGAP8P85298 464 aa23.37■■□□□ 1.33
DDX39A-215ENST00000590696 LMNB2Q03252 620 aa23.37■■□□□ 1.33
DDX39A-215ENST00000590696 SPEM2Q0P670 501 aa23.37■■□□□ 1.33
DDX39A-215ENST00000590696 SRSF5Q13243 272 aaKnown RBP23.37■■□□□ 1.33
DDX39A-215ENST00000590696 RUNX3Q13761 415 aa23.37■■□□□ 1.33
DDX39A-215ENST00000590696 LMBRD2Q68DH5 695 aaPredicted RBP23.37■■□□□ 1.33
DDX39A-215ENST00000590696 HEATR6Q6AI08 1181 aaKnown RBP23.37■■□□□ 1.33
DDX39A-215ENST00000590696 TRIM68Q6AZZ1 485 aa23.37■■□□□ 1.33
DDX39A-215ENST00000590696 MON1AQ86VX9 555 aa23.37■■□□□ 1.33
DDX39A-215ENST00000590696 LONP2Q86WA8 852 aa23.37■■□□□ 1.33
DDX39A-215ENST00000590696 PKMYT1Q99640 499 aa23.37■■□□□ 1.33
DDX39A-215ENST00000590696 ABCB6Q9NP58 842 aa23.37■■□□□ 1.33
DDX39A-215ENST00000590696 HPS4Q9NQG7 708 aa23.37■■□□□ 1.33
DDX39A-215ENST00000590696 SOBPA7XYQ1 873 aa23.36■■□□□ 1.33
DDX39A-215ENST00000590696 STX6O43752 255 aa23.36■■□□□ 1.33
DDX39A-215ENST00000590696 CNR2P34972 360 aa23.36■■□□□ 1.33
DDX39A-215ENST00000590696 LHX1P48742 406 aa23.36■■□□□ 1.33
DDX39A-215ENST00000590696 NASPP49321 788 aaPredicted RBP23.36■■□□□ 1.33
DDX39A-215ENST00000590696 ATXN1P54253 815 aaKnown RBP23.36■■□□□ 1.33
DDX39A-215ENST00000590696 STK38Q15208 465 aa23.36■■□□□ 1.33
DDX39A-215ENST00000590696 CCDC142Q17RM4 750 aa23.36■■□□□ 1.33
DDX39A-215ENST00000590696 ADGRF2Q8IZF7 708 aa23.36■■□□□ 1.33
DDX39A-215ENST00000590696 TOP6BLQ8N6T0 577 aa23.36■■□□□ 1.33
DDX39A-215ENST00000590696 GLIS3Q8NEA6 775 aa23.36■■□□□ 1.33
DDX39A-215ENST00000590696 ANKRD36BP1Q96IX9 119 aa23.36■■□□□ 1.33
DDX39A-215ENST00000590696 EBF3Q9H4W6 596 aa23.36■■□□□ 1.33
DDX39A-215ENST00000590696 KIF9Q9HAQ2 790 aa23.36■■□□□ 1.33
DDX39A-215ENST00000590696 UXTQ9UBK9 157 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms