RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 DRC7Q8IY82 874 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 PPM1KQ8N3J5 372 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 C3orf58Q8NDZ4 430 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 BAP1Q92560 729 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 KREMEN1Q96MU8 473 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 KLHL5Q96PQ7 755 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 STK33Q9BYT3 514 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 BCO2Q9BYV7 579 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 CYP3A43Q9HB55 503 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.73■□□□□ 0.435e-30■■■■■ 372.6
GCDH-213ENST00000590627 CACNG4Q9UBN1 327 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 MYO6Q9UM54 1294 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 FAN1Q9Y2M0 1017 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 RNF225M0QZC1 329 aaPredicted RBP17.72■□□□□ 0.43
GCDH-213ENST00000590627 LILRB3O75022 631 aa17.72■□□□□ 0.43
GCDH-213ENST00000590627 B3GAT3O94766 335 aa17.72■□□□□ 0.43
GCDH-213ENST00000590627 PDGFBP01127 241 aaPredicted RBP17.72■□□□□ 0.43
GCDH-213ENST00000590627 TPM1P09493 284 aa17.72■□□□□ 0.43
GCDH-213ENST00000590627 IGFBP6P24592 240 aaPredicted RBP17.72■□□□□ 0.43
GCDH-213ENST00000590627 CLCN4P51793 760 aa17.72■□□□□ 0.43
GCDH-213ENST00000590627 JAM2P57087 298 aa17.72■□□□□ 0.43
GCDH-213ENST00000590627 ZBED6P86452 979 aa17.72■□□□□ 0.43
GCDH-213ENST00000590627 ARID5BQ14865 1188 aa17.72■□□□□ 0.43
GCDH-213ENST00000590627 RRAGAQ7L523 313 aa17.72■□□□□ 0.43
GCDH-213ENST00000590627 DPH6Q7L8W6 267 aa17.72■□□□□ 0.43
GCDH-213ENST00000590627 ELMO3Q96BJ8 720 aa17.72■□□□□ 0.43
GCDH-213ENST00000590627 PPP1R9BQ96SB3 815 aa17.72■□□□□ 0.43
GCDH-213ENST00000590627 COLEC11Q9BWP8 271 aa17.72■□□□□ 0.43
GCDH-213ENST00000590627 MRPL17Q9NRX2 175 aaKnown RBP17.72■□□□□ 0.43
GCDH-213ENST00000590627 NXF1Q9UBU9 619 aaKnown RBP17.72■□□□□ 0.43
GCDH-213ENST00000590627 AJAP1Q9UKB5 411 aaPredicted RBP17.72■□□□□ 0.43
GCDH-213ENST00000590627 SCN1AP35498 2009 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 NRP1O14786 923 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 KIF4AO95239 1232 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 CNPP09543 421 aaKnown RBP17.71■□□□□ 0.43
GCDH-213ENST00000590627 KLRC2P26717 231 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 CASP14P31944 242 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 OR1G1P47890 313 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 TNNC1P63316 161 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 CCDC173Q0VFZ6 552 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 TMC5Q6UXY8 1006 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 CACNA2D4Q7Z3S7 1137 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 TOP6BLQ8N6T0 577 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 UBR7Q8N806 425 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 SPC24Q8NBT2 197 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 ZNF397Q8NF99 534 aaPredicted RBP17.71■□□□□ 0.43
GCDH-213ENST00000590627 SHC3Q92529 594 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 KAT5Q92993 513 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 ACSF2Q96CM8 615 aaPredicted RBP17.71■□□□□ 0.43
GCDH-213ENST00000590627 NUCKS1Q9H1E3 243 aaKnown RBP17.71■□□□□ 0.43
GCDH-213ENST00000590627 NLRC4Q9NPP4 1024 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 LIMD1Q9UGP4 676 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 POLIQ9UNA4 740 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 CNTN6Q9UQ52 1028 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 SSX2IPQ9Y2D8 614 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 LUC7L2Q9Y383 392 aaKnown RBP17.71■□□□□ 0.43
GCDH-213ENST00000590627 SNX9Q9Y5X1 595 aa17.71■□□□□ 0.43
GCDH-213ENST00000590627 GOLGA6L6A8MZA4 724 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 M0QZQ0 153 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 GALR2O43603 387 aaPredicted RBP17.7■□□□□ 0.42
GCDH-213ENST00000590627 MFAP3LO75121 409 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 TACC1O75410 805 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 SOD2P04179 222 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 ASGR2P07307 311 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 ACO1P21399 889 aaKnown RBP17.7■□□□□ 0.42
GCDH-213ENST00000590627 DRAP1Q14919 205 aaPredicted RBP17.7■□□□□ 0.42
GCDH-213ENST00000590627 CCDC149Q6ZUS6 474 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 OTOP3Q7RTS5 596 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 CNGA4Q8IV77 575 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 TTC39CQ8N584 583 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 SPATA18Q8TC71 538 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 CPLX3Q8WVH0 158 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 RABGGTAQ92696 567 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 SYN2Q92777 582 aaPredicted RBP17.7■□□□□ 0.42
GCDH-213ENST00000590627 SUSD3Q96L08 255 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 SENP8Q96LD8 212 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 ARID3AQ99856 593 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 GPR88Q9GZN0 384 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 MARCH5Q9NX47 278 aa17.7■□□□□ 0.42
GCDH-213ENST00000590627 ARHGEF37A1IGU5 675 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 SPDYE4A6NLX3 237 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 AKR1B15C9JRZ8 316 aaPredicted RBP17.69■□□□□ 0.42
GCDH-213ENST00000590627 F8VZ95 297 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 CYB561D2O14569 222 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 CLSTN1O94985 981 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 EFEMP2O95967 443 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 URODP06132 367 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 KRT9P35527 623 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 GSDMDP57764 484 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 YWHAEP62258 255 aaKnown RBP17.69■□□□□ 0.42
GCDH-213ENST00000590627 INCA1Q0VD86 236 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 RAPGEF1Q13905 1077 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 SOWAHAQ2M3V2 549 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 PDXDC1Q6P996 788 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 FMNL3Q8IVF7 1028 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 CMASQ8NFW8 434 aaPredicted RBP17.69■□□□□ 0.42
GCDH-213ENST00000590627 ATOH1Q92858 354 aaPredicted RBP17.69■□□□□ 0.42
GCDH-213ENST00000590627 SPAG5Q96R06 1193 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 DNAJC7Q99615 494 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 HERC2P3Q9BVR0 1158 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms