RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 TMEM199Q8N511 208 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 APPL2Q8NEU8 664 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 URGCPQ8TCY9 931 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 HEXIM2Q96MH2 286 aaKnown RBP18.01■□□□□ 0.47
GCDH-212ENST00000590530 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.01■□□□□ 0.47
GCDH-212ENST00000590530 V9GYY5 206 aaPredicted RBP18.01■□□□□ 0.47
GCDH-212ENST00000590530 CES2O00748 559 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 HUS1O60921 280 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 ATP2C2O75185 946 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 MYBL1P10243 752 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 CAPN2P17655 700 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 ACAT1P24752 427 aaKnown RBP18.01■□□□□ 0.47
GCDH-212ENST00000590530 OR1G1P47890 313 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 ERCC6LQ2NKX8 1250 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 NAA35Q5VZE5 725 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 C11orf63Q6NUN7 778 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 DENND1BQ6P3S1 775 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 PHLDB2Q86SQ0 1253 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 TTC39CQ8N584 583 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 WDTC1Q8N5D0 677 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 UBE2Q2Q8WVN8 375 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 ABCB6Q9NP58 842 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 AVENQ9NQS1 362 aaPredicted RBP18.01■□□□□ 0.47
GCDH-212ENST00000590530 UVRAGQ9P2Y5 699 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 COG5Q9UP83 839 aa18.01■□□□□ 0.47
GCDH-212ENST00000590530 A8MXQ7 604 aa18■□□□□ 0.47
GCDH-212ENST00000590530 NT5C1B-RDH14C9J2C7 533 aa18■□□□□ 0.47
GCDH-212ENST00000590530 ATMINO43313 823 aaPredicted RBP18■□□□□ 0.47
GCDH-212ENST00000590530 BUB1BO60566 1050 aaPredicted RBP18■□□□□ 0.47
GCDH-212ENST00000590530 LSM8O95777 96 aaKnown RBP18■□□□□ 0.47
GCDH-212ENST00000590530 GNL1P36915 607 aaPredicted RBP18■□□□□ 0.47
GCDH-212ENST00000590530 WDR5P61964 334 aaKnown RBP18■□□□□ 0.47
GCDH-212ENST00000590530 NOMO3P69849 1222 aa18■□□□□ 0.47
GCDH-212ENST00000590530 DSTYKQ6XUX3 929 aa18■□□□□ 0.47
GCDH-212ENST00000590530 CREG2Q8IUH2 290 aa18■□□□□ 0.47
GCDH-212ENST00000590530 TOP6BLQ8N6T0 577 aa18■□□□□ 0.47
GCDH-212ENST00000590530 ZNF653Q96CK0 615 aa18■□□□□ 0.47
GCDH-212ENST00000590530 DDX27Q96GQ7 796 aaKnown RBP18■□□□□ 0.47
GCDH-212ENST00000590530 NT5C1AQ9BXI3 368 aa18■□□□□ 0.47
GCDH-212ENST00000590530 FAM49BQ9NUQ9 324 aa18■□□□□ 0.47
GCDH-212ENST00000590530 CTTNBP2NLQ9P2B4 639 aa18■□□□□ 0.47
GCDH-212ENST00000590530 RNF14Q9UBS8 474 aa18■□□□□ 0.47
GCDH-212ENST00000590530 STXBP5LQ9Y2K9 1186 aa18■□□□□ 0.47
GCDH-212ENST00000590530 TDRD15B5MCY1 1934 aaKnown RBP18■□□□□ 0.47
GCDH-212ENST00000590530 MICAL3Q7RTP6 2002 aa18■□□□□ 0.47
GCDH-212ENST00000590530 PAEPP09466 180 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 NSFP46459 744 aaKnown RBP17.99■□□□□ 0.47
GCDH-212ENST00000590530 BCAR1P56945 870 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 PSMC1P62191 440 aaKnown RBP17.99■□□□□ 0.47
GCDH-212ENST00000590530 ITIH3Q06033 890 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 RPS6KA1Q15418 735 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 DCLRE1AQ6PJP8 1040 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 DAAM2Q86T65 1068 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 NT5DC3Q86UY8 548 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 TMEM173Q86WV6 379 aaPredicted RBP17.99■□□□□ 0.47
GCDH-212ENST00000590530 COG1Q8WTW3 980 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 PDCL3Q9H2J4 239 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 CYTH4Q9UIA0 394 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 COL4A6Q14031 1691 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 ZNF185O15231 689 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 DGKIO75912 1065 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 WARSP23381 471 aaKnown RBP17.99■□□□□ 0.47
GCDH-212ENST00000590530 SLC11A1P49279 550 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 TEX35Q5T0J7 233 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 PEX26Q7Z412 305 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 PHF13Q86YI8 300 aaPredicted RBP17.99■□□□□ 0.47
GCDH-212ENST00000590530 MCOLN2Q8IZK6 566 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 C1orf131Q8NDD1 294 aaKnown RBP17.99■□□□□ 0.47
GCDH-212ENST00000590530 RSPH1Q8WYR4 309 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 TOP1MTQ969P6 601 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 VCPIP1Q96JH7 1222 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 CAPZA3Q96KX2 299 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 RTP3Q9BQQ7 232 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 SNX25Q9H3E2 840 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 IL23AQ9NPF7 189 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 KANSL3Q9P2N6 904 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 ZMYND8Q9ULU4 1186 aaPredicted RBP17.99■□□□□ 0.47
GCDH-212ENST00000590530 PCDHGC3Q9UN70 934 aa17.99■□□□□ 0.47
GCDH-212ENST00000590530 ABHD14A-ACY1A0A1B0GW23 586 aa17.98■□□□□ 0.47
GCDH-212ENST00000590530 O00370 1275 aa17.98■□□□□ 0.47
GCDH-212ENST00000590530 GABRDO14764 452 aa17.98■□□□□ 0.47
GCDH-212ENST00000590530 NRP1O14786 923 aa17.98■□□□□ 0.47
GCDH-212ENST00000590530 PPP1R26Q5T8A7 1209 aaPredicted RBP17.98■□□□□ 0.47
GCDH-212ENST00000590530 ZNF365Q70YC5 407 aa17.98■□□□□ 0.47
GCDH-212ENST00000590530 MON1BQ7L1V2 547 aa17.98■□□□□ 0.47
GCDH-212ENST00000590530 UBA3Q8TBC4 463 aa17.98■□□□□ 0.47
GCDH-212ENST00000590530 BCL7CQ8WUZ0 217 aaPredicted RBP17.98■□□□□ 0.47
GCDH-212ENST00000590530 UROC1Q96N76 676 aa17.98■□□□□ 0.47
GCDH-212ENST00000590530 FAM193BQ96PV7 902 aaPredicted RBP17.98■□□□□ 0.47
GCDH-212ENST00000590530 CXXC1Q9P0U4 656 aaPredicted RBP17.98■□□□□ 0.47
GCDH-212ENST00000590530 TJP2Q9UDY2 1190 aa17.98■□□□□ 0.47
GCDH-212ENST00000590530 MICAL2O94851 1124 aa17.97■□□□□ 0.47
GCDH-212ENST00000590530 CCDC130P13994 396 aa17.97■□□□□ 0.47
GCDH-212ENST00000590530 CDH5P33151 784 aaPredicted RBP17.97■□□□□ 0.47
GCDH-212ENST00000590530 GPR161Q8N6U8 529 aaKnown RBP17.97■□□□□ 0.47
GCDH-212ENST00000590530 ZNF564Q8TBZ8 553 aaPredicted RBP17.97■□□□□ 0.47
GCDH-212ENST00000590530 HES6Q96HZ4 224 aa17.97■□□□□ 0.47
GCDH-212ENST00000590530 B3GALT6Q96L58 329 aa17.97■□□□□ 0.47
GCDH-212ENST00000590530 NUP85Q9BW27 656 aa17.97■□□□□ 0.47
GCDH-212ENST00000590530 ZNF518BQ9C0D4 1074 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms