RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 ZXDAP98168 799 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 GPR17Q13304 367 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 MYBPC2Q14324 1141 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 KCNB1Q14721 858 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 PSMD6Q15008 389 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 SURF1Q15526 300 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 SV2CQ496J9 727 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 TMEM31Q5JXX7 168 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 LMBRD2Q68DH5 695 aaPredicted RBP12.07□□□□□ -0.48
SMAD4-211ENST00000590499 GRASPQ7Z6J2 395 aaPredicted RBP12.07□□□□□ -0.48
SMAD4-211ENST00000590499 USP37Q86T82 979 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 WDR49Q8IV35 697 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 SLC9A9Q8IVB4 645 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 GOLGA5Q8TBA6 731 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 ACSF2Q96CM8 615 aaPredicted RBP12.07□□□□□ -0.48
SMAD4-211ENST00000590499 MFSD14AQ96MC6 490 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 MYADMQ96S97 322 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 TMEM209Q96SK2 561 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 CRISPLD1Q9H336 500 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 PIDD1Q9HB75 910 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 DNMT3BQ9UBC3 853 aaKnown RBP12.07□□□□□ -0.48
SMAD4-211ENST00000590499 FKBPLQ9UIM3 349 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 DSEQ9UL01 958 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 AGAP1Q9UPQ3 857 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 INSL5Q9Y5Q6 135 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 PRR33A8MZF0 331 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 PDXKO00764 312 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 PRRG1O14668 218 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 ASGR2P07307 311 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 TMEM191BP0C7N4 346 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 CPB1P15086 417 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 RBP5P82980 135 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 FAM160A1Q05DH4 1040 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 ADCY1Q08828 1119 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 DUOXA2Q1HG44 320 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 WSCD1Q658N2 575 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 LIMS2Q7Z4I7 341 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 CSGALNACT2Q8N6G5 542 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 PLEKHO2Q8TD55 490 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 CGRRF1Q99675 332 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 CYP4F11Q9HBI6 524 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 AVENQ9NQS1 362 aaPredicted RBP12.06□□□□□ -0.48
SMAD4-211ENST00000590499 HCFC1R1Q9NWW0 138 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 GDAP2Q9NXN4 497 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.06□□□□□ -0.48
SMAD4-211ENST00000590499 L1RE1Q9UN81 338 aa12.06□□□□□ -0.48
SMAD4-211ENST00000590499 MTMR11A4FU01 709 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 EXOC3O60645 756 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 ZIC2O95409 532 aaPredicted RBP12.05□□□□□ -0.48
SMAD4-211ENST00000590499 TNNC2P02585 160 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 NR3C1P04150 777 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 FSHRP23945 695 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 ELF1P32519 619 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 CLDN10P78369 228 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 SIGLEC14Q08ET2 396 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 PNOCQ13519 176 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 NFIL3Q16649 462 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 SLC5A9Q2M3M2 681 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 ZCWPW2Q504Y3 356 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 CENPPQ6IPU0 288 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 GET4Q7L5D6 327 aaPredicted RBP12.05□□□□□ -0.48
SMAD4-211ENST00000590499 TRAPPC11Q7Z392 1133 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 PDCL2Q8N4E4 241 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 SPATA20Q8TB22 786 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 ITFG1Q8TB96 612 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 ITPKCQ96DU7 683 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 ASIC4Q96FT7 647 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 ANKRD36BP1Q96IX9 119 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 TIGD1Q96MW7 591 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 PGLYRP2Q96PD5 576 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 ZCWPW1Q9H0M4 648 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 SMOC2Q9H3U7 446 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 ZFAND3Q9H8U3 227 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 KCNK12Q9HB15 430 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 SORCS3Q9UPU3 1222 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 TRAF3IP3Q9Y228 551 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 YIPF1Q9Y548 306 aa12.05□□□□□ -0.48
SMAD4-211ENST00000590499 PTPRDP23468 1912 aa12.04□□□□□ -0.48
SMAD4-211ENST00000590499 GOLGA6L4A6NEF3 574 aa12.04□□□□□ -0.48
SMAD4-211ENST00000590499 ANHXE9PGG2 379 aa12.04□□□□□ -0.48
SMAD4-211ENST00000590499 PRPF40AO75400 957 aaKnown RBP12.04□□□□□ -0.48
SMAD4-211ENST00000590499 LRG1P02750 347 aa12.04□□□□□ -0.48
SMAD4-211ENST00000590499 RHOP08100 348 aa12.04□□□□□ -0.48
SMAD4-211ENST00000590499 KRT19P08727 400 aa12.04□□□□□ -0.48
SMAD4-211ENST00000590499 DLATP10515 647 aaKnown RBP12.04□□□□□ -0.48
SMAD4-211ENST00000590499 LAMP2P13473 410 aa12.04□□□□□ -0.48
SMAD4-211ENST00000590499 GBP2P32456 591 aaPredicted RBP12.04□□□□□ -0.48
SMAD4-211ENST00000590499 CASP4P49662 377 aa12.04□□□□□ -0.48
SMAD4-211ENST00000590499 TWF1Q12792 350 aa12.04□□□□□ -0.48
SMAD4-211ENST00000590499 BFSP1Q12934 665 aa12.04□□□□□ -0.48
SMAD4-211ENST00000590499 MTMR3Q13615 1198 aa12.04□□□□□ -0.48
SMAD4-211ENST00000590499 HTR4Q13639 388 aa12.04□□□□□ -0.48
SMAD4-211ENST00000590499 PABPC1LQ4VXU2 614 aaKnown RBP12.04□□□□□ -0.48
SMAD4-211ENST00000590499 PRSS36Q5K4E3 855 aa12.04□□□□□ -0.48
SMAD4-211ENST00000590499 VASH1Q7L8A9 365 aaPredicted RBP12.04□□□□□ -0.48
SMAD4-211ENST00000590499 LRRTM3Q86VH5 581 aa12.04□□□□□ -0.48
SMAD4-211ENST00000590499 UBALD2Q8IYN6 164 aa12.04□□□□□ -0.48
SMAD4-211ENST00000590499 GUF1Q8N442 669 aaKnown RBP12.04□□□□□ -0.48
SMAD4-211ENST00000590499 TTC9BQ8N6N2 239 aa12.04□□□□□ -0.48
SMAD4-211ENST00000590499 TOP6BLQ8N6T0 577 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms