RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 TMEM119Q4V9L6 283 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 UGT2A3Q6UWM9 527 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 FBXO33Q7Z6M2 555 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 C17orf50Q8WW18 174 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 IVNS1ABPQ9Y6Y0 642 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 LOC100653049A0A140TA62 436 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 SMIM31A0A1B0GVY4 71 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 TRMUO75648 421 aaKnown RBP15.93■□□□□ 0.14
CIRBP-228ENST00000590347 KRT34O76011 436 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 GPC5P78333 572 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 SULT2A1Q06520 285 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 ITGA7Q13683 1181 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 GRM4Q14833 912 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 PRR5LQ6MZQ0 368 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 TMC7Q7Z402 723 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 FAM186BQ8IYM0 893 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 FNDC8Q8TC99 324 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 ACSF2Q96CM8 615 aaPredicted RBP15.93■□□□□ 0.14
CIRBP-228ENST00000590347 EURLQ9NYK6 297 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 IL1RAPL1Q9NZN1 696 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 DDX25Q9UHL0 483 aaKnown RBP15.93■□□□□ 0.14
CIRBP-228ENST00000590347 INPP5FQ9Y2H2 1132 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 BCORQ6W2J9 1755 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 MIF4GDA9UHW6 222 aaKnown RBP15.93■□□□□ 0.14
CIRBP-228ENST00000590347 TYROBPO43914 113 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 RALAP11233 206 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 TFDP1Q14186 410 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 SLC10A5Q5PT55 438 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 KCNN1Q92952 543 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 ACAP3Q96P50 834 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 RAB34Q9BZG1 259 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 INTS2Q9H0H0 1204 aaKnown RBP15.93■□□□□ 0.14
CIRBP-228ENST00000590347 GPCPD1Q9NPB8 672 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 XPNPEP1Q9NQW7 623 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 CIDEBQ9UHD4 219 aa15.93■□□□□ 0.14
CIRBP-228ENST00000590347 RPL26L1Q9UNX3 145 aaKnown RBP15.93■□□□□ 0.14
CIRBP-228ENST00000590347 ADCY6O43306 1168 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 ATP9BO43861 1147 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 BMP3P12645 472 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 CD58P19256 250 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 GNA11P29992 359 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 MARSP56192 900 aaKnown RBP15.92■□□□□ 0.14
CIRBP-228ENST00000590347 C6orf52Q5T4I8 152 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 FRMD5Q7Z6J6 570 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 PATL1Q86TB9 770 aaKnown RBP15.92■□□□□ 0.14
CIRBP-228ENST00000590347 ARHGEF19Q8IW93 802 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 POLR3CQ9BUI4 534 aaPredicted RBP15.92■□□□□ 0.14
CIRBP-228ENST00000590347 TISP43B9A030 160 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 C6orf229H3BNL8 230 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 RPL5P46777 297 aaKnown RBP15.92■□□□□ 0.14
CIRBP-228ENST00000590347 NCKAP1LP55160 1127 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 ANO5Q75V66 913 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 ARHGAP24Q8N264 748 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 FAM172AQ8WUF8 416 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 ZNF512Q96ME7 567 aaPredicted RBP15.92■□□□□ 0.14
CIRBP-228ENST00000590347 PCIF1Q9H4Z3 704 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 S100A14Q9HCY8 104 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 ASTN1O14525 1302 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 DUOX1Q9NRD9 1551 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 ZBTB39O15060 712 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 UFL1O94874 794 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 KRT10P13645 584 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 HSPA6P17066 643 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 RC3H1Q5TC82 1133 aaKnown RBP15.92■□□□□ 0.14
CIRBP-228ENST00000590347 SLC2A7Q6PXP3 512 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 ZCCHC23Q6ZST2 131 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 DENND5BQ6ZUT9 1274 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 EBF4Q9BQW3 602 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 TMEM98Q9Y2Y6 226 aa15.92■□□□□ 0.14
CIRBP-228ENST00000590347 USP17L5A8MUK1 530 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 A8MXQ7 604 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 SPECC1L-ADORA2AF8WAN1 911 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 ADAM23O75077 832 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 SERPINB2P05120 415 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 DLDP09622 509 aaKnown RBP15.91■□□□□ 0.14
CIRBP-228ENST00000590347 FMO5P49326 533 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 VCPP55072 806 aaKnown RBP15.91■□□□□ 0.14
CIRBP-228ENST00000590347 DLG4P78352 724 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 ANKRD20A4Q4UJ75 823 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 ANKS1BQ7Z6G8 1248 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 MAPKAPK5Q8IW41 473 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 RHOT2Q8IXI1 618 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 ICA1LQ8NDH6 482 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 NACA2Q9H009 215 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 TBC1D12O60347 775 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 TM7SF2O76062 418 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 ZFXP17010 805 aaPredicted RBP15.91■□□□□ 0.14
CIRBP-228ENST00000590347 FXR2P51116 673 aaKnown RBP eCLIP15.91■□□□□ 0.14
CIRBP-228ENST00000590347 GEMIN4P57678 1058 aaKnown RBP15.91■□□□□ 0.14
CIRBP-228ENST00000590347 SMAD1Q15797 465 aaKnown RBP15.91■□□□□ 0.14
CIRBP-228ENST00000590347 OGFOD2Q6N063 350 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 HPS6Q86YV9 775 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 BRIP1Q9BX63 1249 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 LRRC19Q9H756 370 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 AFG3L2Q9Y4W6 797 aa15.91■□□□□ 0.14
CIRBP-228ENST00000590347 TIAM2Q8IVF5 1701 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 FRMPD4Q14CM0 1322 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 PIK3R2O00459 728 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 FBP2O00757 339 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 CYB561D2O14569 222 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms