RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 RMDN1Q96DB5 314 aa19.37■□□□□ 0.69
H3F3B-209ENST00000589949 TNMDQ9H2S6 317 aa19.37■□□□□ 0.69
H3F3B-209ENST00000589949 TMEM206Q9H813 350 aa19.37■□□□□ 0.69
H3F3B-209ENST00000589949 INTS13Q9NVM9 706 aa19.37■□□□□ 0.69
H3F3B-209ENST00000589949 DDX43Q9NXZ2 648 aaKnown RBP19.37■□□□□ 0.69
H3F3B-209ENST00000589949 GTF3C4Q9UKN8 822 aa19.37■□□□□ 0.69
H3F3B-209ENST00000589949 ITGA11Q9UKX5 1188 aa19.37■□□□□ 0.69
H3F3B-209ENST00000589949 SNX9Q9Y5X1 595 aa19.37■□□□□ 0.69
H3F3B-209ENST00000589949 MYBPHLA2RUH7 354 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 SPECC1L-ADORA2AF8WAN1 911 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 GABRDO14764 452 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 TGFB1I1O43294 461 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 ATP2C2O75185 946 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 PRPF40AO75400 957 aaKnown RBP19.36■□□□□ 0.69
H3F3B-209ENST00000589949 KRT19P08727 400 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 WEE1P30291 646 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 CTHP32929 405 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 ID4P47928 161 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 SATB1Q01826 763 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 SMARCB1Q12824 385 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 DDR2Q16832 855 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 ARHGAP15Q53QZ3 475 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 INTS6LQ5JSJ4 861 aaKnown RBP19.36■□□□□ 0.69
H3F3B-209ENST00000589949 Q6ZS52 159 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 LIMS2Q7Z4I7 341 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 CMTM8Q8IZV2 173 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 ATRIPQ8WXE1 791 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 SNX21Q969T3 373 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 CHFRQ96EP1 664 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 ACBD6Q9BR61 282 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 OBP2AQ9NY56 170 aa19.36■□□□□ 0.69
H3F3B-209ENST00000589949 OTOL1A6NHN0 477 aaPredicted RBP19.35■□□□□ 0.69
H3F3B-209ENST00000589949 DPYSL4O14531 572 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 CUTAO60888 179 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 HUS1O60921 280 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 TADA3O75528 432 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 YEATS4O95619 227 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 CDC25CP30307 473 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 KPNA1P52294 538 aaPredicted RBP19.35■□□□□ 0.69
H3F3B-209ENST00000589949 RBP5P82980 135 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 TSPY1Q01534 308 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 EHHADHQ08426 723 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 DMWDQ09019 674 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 PKP1Q13835 747 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 TXNDC8Q6A555 127 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 CNNM4Q6P4Q7 775 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 MAB21L3Q8N8X9 362 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 BPIFB1Q8TDL5 484 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 LEO1Q8WVC0 666 aaPredicted RBP19.35■□□□□ 0.69
H3F3B-209ENST00000589949 KBTBD7Q8WVZ9 684 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 USP13Q92995 863 aaPredicted RBP19.35■□□□□ 0.69
H3F3B-209ENST00000589949 GZF1Q9H116 711 aaPredicted RBP19.35■□□□□ 0.69
H3F3B-209ENST00000589949 EPC1Q9H2F5 836 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 HSPBP1Q9NZL4 362 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 NME7Q9Y5B8 376 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 DENND4CQ5VZ89 1909 aa19.35■□□□□ 0.69
H3F3B-209ENST00000589949 KIF26AQ9ULI4 1882 aaPredicted RBP19.35■□□□□ 0.69
H3F3B-209ENST00000589949 LMO2P25791 158 aa19.34■□□□□ 0.69
H3F3B-209ENST00000589949 ASIC1P78348 528 aa19.34■□□□□ 0.69
H3F3B-209ENST00000589949 ARHGAP29Q52LW3 1261 aa19.34■□□□□ 0.69
H3F3B-209ENST00000589949 ADGRF2Q8IZF7 708 aa19.34■□□□□ 0.69
H3F3B-209ENST00000589949 TMEM86AQ8N2M4 240 aa19.34■□□□□ 0.69
H3F3B-209ENST00000589949 TOP6BLQ8N6T0 577 aa19.34■□□□□ 0.69
H3F3B-209ENST00000589949 ZNF507Q8TCN5 953 aa19.34■□□□□ 0.69
H3F3B-209ENST00000589949 ZNF396Q96N95 335 aaPredicted RBP19.34■□□□□ 0.69
H3F3B-209ENST00000589949 HINFPQ9BQA5 517 aa19.34■□□□□ 0.69
H3F3B-209ENST00000589949 FAM83CQ9BQN1 747 aa19.34■□□□□ 0.69
H3F3B-209ENST00000589949 C8orf33Q9H7E9 229 aaPredicted RBP19.34■□□□□ 0.69
H3F3B-209ENST00000589949 MAGED2Q9UNF1 606 aaPredicted RBP19.34■□□□□ 0.69
H3F3B-209ENST00000589949 OBSL1O75147 1896 aa19.34■□□□□ 0.69
H3F3B-209ENST00000589949 ZNF233A6NK53 670 aa19.33■□□□□ 0.68
H3F3B-209ENST00000589949 TMEM191BP0C7N4 346 aa19.33■□□□□ 0.68
H3F3B-209ENST00000589949 PON2Q15165 354 aa19.33■□□□□ 0.68
H3F3B-209ENST00000589949 TAF12Q16514 161 aa19.33■□□□□ 0.68
H3F3B-209ENST00000589949 NFE2Q16621 373 aaPredicted RBP19.33■□□□□ 0.68
H3F3B-209ENST00000589949 TRIM68Q6AZZ1 485 aa19.33■□□□□ 0.68
H3F3B-209ENST00000589949 RALGPS2Q86X27 583 aaPredicted RBP19.33■□□□□ 0.68
H3F3B-209ENST00000589949 CELF5Q8N6W0 485 aaKnown RBP19.33■□□□□ 0.68
H3F3B-209ENST00000589949 SCFD1Q8WVM8 642 aa19.33■□□□□ 0.68
H3F3B-209ENST00000589949 HPDLQ96IR7 371 aa19.33■□□□□ 0.68
H3F3B-209ENST00000589949 SLC22A12Q96S37 553 aa19.33■□□□□ 0.68
H3F3B-209ENST00000589949 C7orf25Q9BPX7 421 aa19.33■□□□□ 0.68
H3F3B-209ENST00000589949 BLZF1Q9H2G9 400 aa19.33■□□□□ 0.68
H3F3B-209ENST00000589949 CUEDC2Q9H467 287 aa19.33■□□□□ 0.68
H3F3B-209ENST00000589949 ABCB6Q9NP58 842 aa19.33■□□□□ 0.68
H3F3B-209ENST00000589949 HPS4Q9NQG7 708 aa19.33■□□□□ 0.68
H3F3B-209ENST00000589949 AGPAT3Q9NRZ7 376 aa19.33■□□□□ 0.68
H3F3B-209ENST00000589949 GKN1Q9NS71 199 aa19.33■□□□□ 0.68
H3F3B-209ENST00000589949 PCDHA7Q9UN72 937 aa19.33■□□□□ 0.68
H3F3B-209ENST00000589949 SMG5Q9UPR3 1016 aaKnown RBP19.33■□□□□ 0.68
H3F3B-209ENST00000589949 K7ESF4 209 aa19.32■□□□□ 0.68
H3F3B-209ENST00000589949 KIAA0391O15091 583 aaKnown RBP19.32■□□□□ 0.68
H3F3B-209ENST00000589949 CLIC2O15247 247 aa19.32■□□□□ 0.68
H3F3B-209ENST00000589949 EIF3DO15371 548 aaKnown RBP eCLIP19.32■□□□□ 0.68
H3F3B-209ENST00000589949 POLR2DO15514 142 aaKnown RBP19.32■□□□□ 0.68
H3F3B-209ENST00000589949 NOL4O94818 638 aa19.32■□□□□ 0.68
H3F3B-209ENST00000589949 CST3P01034 146 aaPredicted RBP19.32■□□□□ 0.68
H3F3B-209ENST00000589949 ZSCAN22P10073 491 aaPredicted RBP19.32■□□□□ 0.68
H3F3B-209ENST00000589949 TGM1P22735 817 aa19.32■□□□□ 0.68
H3F3B-209ENST00000589949 PSMC1P62191 440 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms