RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 CPSF3Q9UKF6 684 aaKnown RBP16.45■□□□□ 0.22
ACTN4-211ENST00000589528 DERAQ9Y315 318 aa16.45■□□□□ 0.22
ACTN4-211ENST00000589528 PCDHB5Q9Y5E4 795 aa16.45■□□□□ 0.22
ACTN4-211ENST00000589528 CHD6Q8TD26 2715 aa16.45■□□□□ 0.22
ACTN4-211ENST00000589528 A0A0B4J269 797 aa16.44■□□□□ 0.22
ACTN4-211ENST00000589528 OTOL1A6NHN0 477 aaPredicted RBP16.44■□□□□ 0.22
ACTN4-211ENST00000589528 PIRO00625 290 aa16.44■□□□□ 0.22
ACTN4-211ENST00000589528 FAM189A1O60320 539 aa16.44■□□□□ 0.22
ACTN4-211ENST00000589528 APBB3O95704 486 aa16.44■□□□□ 0.22
ACTN4-211ENST00000589528 CAVIN2O95810 425 aa16.44■□□□□ 0.22
ACTN4-211ENST00000589528 GALK1P51570 392 aa16.44■□□□□ 0.22
ACTN4-211ENST00000589528 DGKEP52429 567 aa16.44■□□□□ 0.22
ACTN4-211ENST00000589528 NLRP12P59046 1061 aa16.44■□□□□ 0.22
ACTN4-211ENST00000589528 TSPY1Q01534 308 aa16.44■□□□□ 0.22
ACTN4-211ENST00000589528 DHX8Q14562 1220 aaKnown RBP16.44■□□□□ 0.22
ACTN4-211ENST00000589528 PDGFRLQ15198 375 aa16.44■□□□□ 0.22
ACTN4-211ENST00000589528 RILPL1Q5EBL4 403 aa16.44■□□□□ 0.22
ACTN4-211ENST00000589528 DAB2IPQ5VWQ8 1189 aa16.44■□□□□ 0.22
ACTN4-211ENST00000589528 GPBP1Q86WP2 473 aa16.44■□□□□ 0.22
ACTN4-211ENST00000589528 REEP2Q9BRK0 252 aa16.44■□□□□ 0.22
ACTN4-211ENST00000589528 DUSP15Q9H1R2 295 aaPredicted RBP16.44■□□□□ 0.22
ACTN4-211ENST00000589528 POLR3BQ9NW08 1133 aaPredicted RBP16.44■□□□□ 0.22
ACTN4-211ENST00000589528 FAM208BQ5VWN6 2430 aa16.44■□□□□ 0.22
ACTN4-211ENST00000589528 KIAA1549LQ6ZVL6 1849 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 ANO9A1A5B4 782 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 PRPF40AO75400 957 aaKnown RBP16.43■□□□□ 0.22
ACTN4-211ENST00000589528 PIGRP01833 764 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 PROS1P07225 676 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 ADRB2P07550 413 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 CSH1P0DML2 217 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 CSH2P0DML3 217 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 ABCD1P33897 745 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 ACOT2P49753 483 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 ATP2C1P98194 919 aaPredicted RBP16.43■□□□□ 0.22
ACTN4-211ENST00000589528 DMC1Q14565 340 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 SV2CQ496J9 727 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 WSCD1Q658N2 575 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 ADALQ6DHV7 355 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 RASSF8Q8NHQ8 419 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 CHFRQ96EP1 664 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 CALML4Q96GE6 196 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 ZNF560Q96MR9 790 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 PI4K2AQ9BTU6 479 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 ASB7Q9H672 318 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 PARVGQ9HBI0 331 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 TRPC7Q9HCX4 862 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 DPP3Q9NY33 737 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 UXTQ9UBK9 157 aaPredicted RBP16.43■□□□□ 0.22
ACTN4-211ENST00000589528 RALYQ9UKM9 306 aaKnown RBP16.43■□□□□ 0.22
ACTN4-211ENST00000589528 C2CD2Q9Y426 696 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 KIF3AQ9Y496 699 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 FRYQ5TBA9 3013 aa16.43■□□□□ 0.22
ACTN4-211ENST00000589528 C4orf47A7E2U8 309 aa16.42■□□□□ 0.22
ACTN4-211ENST00000589528 DCLK1O15075 740 aa16.42■□□□□ 0.22
ACTN4-211ENST00000589528 TRAK2O60296 914 aa16.42■□□□□ 0.22
ACTN4-211ENST00000589528 TBCAO75347 108 aaKnown RBP16.42■□□□□ 0.22
ACTN4-211ENST00000589528 F11P03951 625 aa16.42■□□□□ 0.22
ACTN4-211ENST00000589528 GJA4P35212 333 aa16.42■□□□□ 0.22
ACTN4-211ENST00000589528 IFNAR2P48551 515 aa16.42■□□□□ 0.22
ACTN4-211ENST00000589528 ZNF252P-AS1Q0IIN9 211 aa16.42■□□□□ 0.22
ACTN4-211ENST00000589528 ARSHQ5FYA8 562 aa16.42■□□□□ 0.22
ACTN4-211ENST00000589528 UNQ6494/PRO21346Q6UXR6 183 aa16.42■□□□□ 0.22
ACTN4-211ENST00000589528 SYT13Q7L8C5 426 aa16.42■□□□□ 0.22
ACTN4-211ENST00000589528 LRRTM3Q86VH5 581 aa16.42■□□□□ 0.22
ACTN4-211ENST00000589528 CCDC26Q8TAB7 109 aa16.42■□□□□ 0.22
ACTN4-211ENST00000589528 CD101Q93033 1021 aa16.42■□□□□ 0.22
ACTN4-211ENST00000589528 ATP2A3Q93084 1043 aa16.42■□□□□ 0.22
ACTN4-211ENST00000589528 ECT2Q9H8V3 914 aa16.42■□□□□ 0.22
ACTN4-211ENST00000589528 DUS2Q9NX74 493 aaKnown RBP16.42■□□□□ 0.22
ACTN4-211ENST00000589528 ANAPC1Q9H1A4 1944 aa16.41■□□□□ 0.22
ACTN4-211ENST00000589528 BCLAF3A2AJT9 711 aaKnown RBP16.41■□□□□ 0.22
ACTN4-211ENST00000589528 SOBPA7XYQ1 873 aa16.41■□□□□ 0.22
ACTN4-211ENST00000589528 KPNA7A9QM74 516 aa16.41■□□□□ 0.22
ACTN4-211ENST00000589528 HMGA1P17096 107 aaKnown RBP16.41■□□□□ 0.22
ACTN4-211ENST00000589528 FAM160A1Q05DH4 1040 aa16.41■□□□□ 0.22
ACTN4-211ENST00000589528 FOXC1Q12948 553 aa16.41■□□□□ 0.22
ACTN4-211ENST00000589528 NR1H3Q13133 447 aa16.41■□□□□ 0.22
ACTN4-211ENST00000589528 ZNF268Q14587 947 aaPredicted RBP16.41■□□□□ 0.22
ACTN4-211ENST00000589528 MTF1Q14872 753 aa16.41■□□□□ 0.22
ACTN4-211ENST00000589528 NFE2Q16621 373 aaPredicted RBP16.41■□□□□ 0.22
ACTN4-211ENST00000589528 TMEM119Q4V9L6 283 aa16.41■□□□□ 0.22
ACTN4-211ENST00000589528 SLFN12LQ6IEE8 588 aa16.41■□□□□ 0.22
ACTN4-211ENST00000589528 TMEM150AQ86TG1 271 aa16.41■□□□□ 0.22
ACTN4-211ENST00000589528 MON1AQ86VX9 555 aa16.41■□□□□ 0.22
ACTN4-211ENST00000589528 STKLD1Q8NE28 680 aa16.41■□□□□ 0.22
ACTN4-211ENST00000589528 TSTD1Q8NFU3 115 aa16.41■□□□□ 0.22
ACTN4-211ENST00000589528 KCNN1Q92952 543 aa16.41■□□□□ 0.22
ACTN4-211ENST00000589528 FBRSL1Q9HCM7 1045 aaKnown RBP16.41■□□□□ 0.22
ACTN4-211ENST00000589528 EBF1Q9UH73 591 aa16.41■□□□□ 0.22
ACTN4-211ENST00000589528 AGO2Q9UKV8 859 aaKnown RBP16.41■□□□□ 0.22
ACTN4-211ENST00000589528 HELZP42694 1942 aaKnown RBP16.41■□□□□ 0.22
ACTN4-211ENST00000589528 C1QTNF9BB2RNN3 333 aa16.4■□□□□ 0.22
ACTN4-211ENST00000589528 CKMP06732 381 aa16.4■□□□□ 0.22
ACTN4-211ENST00000589528 NEFLP07196 543 aa16.4■□□□□ 0.22
ACTN4-211ENST00000589528 USP17L7P0C7H9 530 aa16.4■□□□□ 0.22
ACTN4-211ENST00000589528 C1QTNF9P0C862 333 aa16.4■□□□□ 0.22
ACTN4-211ENST00000589528 UBA7P41226 1012 aa16.4■□□□□ 0.22
ACTN4-211ENST00000589528 GPR15P49685 360 aa16.4■□□□□ 0.22
ACTN4-211ENST00000589528 RPL10AP62906 217 aaKnown RBP16.4■□□□□ 0.22
ACTN4-211ENST00000589528 USP39Q53GS9 565 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms