RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 ANKRD33Q7Z3H0 272 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 ADAT2Q7Z6V5 191 aaKnown RBP10.54□□□□□ -0.72
VPS25-202ENST00000589219 CCDC105Q8IYK2 499 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 KLHDC9Q8NEP7 349 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 EXD1Q8NHP7 514 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 AFG1LQ8WV93 481 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 UBLCP1Q8WVY7 318 aaPredicted RBP10.54□□□□□ -0.72
VPS25-202ENST00000589219 RBM41Q96IZ5 413 aaKnown RBP10.54□□□□□ -0.72
VPS25-202ENST00000589219 GLT1D1Q96MS3 346 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 TOX2Q96NM4 488 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 CAPS2Q9BXY5 557 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 PDZD7Q9H5P4 517 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 TMBIM4Q9HC24 238 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 STARD7Q9NQZ5 370 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 FEZ2Q9UHY8 353 aaPredicted RBP10.54□□□□□ -0.72
VPS25-202ENST00000589219 AKT3Q9Y243 479 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 C2CD2Q9Y426 696 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 FARP1Q9Y4F1 1045 aaPredicted RBP10.54□□□□□ -0.72
VPS25-202ENST00000589219 TRIM43BA6NCK2 446 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 SRRM3A6NNA2 597 aaPredicted RBP10.53□□□□□ -0.72
VPS25-202ENST00000589219 NDC80O14777 642 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 KIAA0355O15063 1070 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 TLR3O15455 904 aaKnown RBP10.53□□□□□ -0.72
VPS25-202ENST00000589219 CST3P01034 146 aaPredicted RBP10.53□□□□□ -0.72
VPS25-202ENST00000589219 CALCAP01258 141 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 KRT14P02533 472 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 MMP3P08254 477 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 STAG3L1P0CL83 205 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 CD58P19256 250 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 NR1D1P20393 614 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 BRD2P25440 801 aaKnown RBP10.53□□□□□ -0.72
VPS25-202ENST00000589219 CST5P28325 142 aaPredicted RBP10.53□□□□□ -0.72
VPS25-202ENST00000589219 PTPN7P35236 360 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 COPS2P61201 443 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 IGBP1P78318 339 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 CDC42EP1Q00587 391 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 CAV1Q03135 178 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 DHX9Q08211 1270 aaKnown RBP10.53□□□□□ -0.72
VPS25-202ENST00000589219 PTK6Q13882 451 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 PCBP1Q15365 356 aaKnown RBP eCLIP10.53□□□□□ -0.72
VPS25-202ENST00000589219 PPP1R7Q15435 360 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 SHHQ15465 462 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 GRIK4Q16099 956 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 DUSP28Q4G0W2 176 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 ZNF697Q5TEC3 545 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 MTHFD1LQ6UB35 978 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 SCARA5Q6ZMJ2 495 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 CPNE8Q86YQ8 564 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 NIPA2Q8N8Q9 360 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 C3orf20Q8ND61 904 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 OR6J1Q8NGC5 347 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 ARL8AQ96BM9 186 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 TRIM43Q96BQ3 446 aaPredicted RBP10.53□□□□□ -0.72
VPS25-202ENST00000589219 LENG1Q96BZ8 264 aaPredicted RBP10.53□□□□□ -0.72
VPS25-202ENST00000589219 ADPGKQ9BRR6 497 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 C16orf70Q9BSU1 422 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 TRIM31Q9BZY9 425 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 DCLK3Q9C098 648 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 TSPYL1Q9H0U9 437 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 LHX5Q9H2C1 402 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 RNPEPQ9H4A4 650 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 MINDY3Q9H8M7 445 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 IFT122Q9HBG6 1241 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 TMEM39AQ9NV64 488 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 GRHL1Q9NZI5 618 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 WHRNQ9P202 907 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 WDR35Q9P2L0 1181 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 ITGA11Q9UKX5 1188 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 NFS1Q9Y697 457 aa10.53□□□□□ -0.72
VPS25-202ENST00000589219 A0A087WZ62 844 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 TCRBV5S1A1TA0A578 114 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 TMEM191CA6NGB0 347 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 RRN3P2A6NIE6 340 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 ASGR1P07306 291 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 CFHP08603 1231 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 NFICP08651 508 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 ZNF286BP0CG31 522 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 RPL21P46778 160 aaKnown RBP10.52□□□□□ -0.73
VPS25-202ENST00000589219 CDR1P51861 262 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 PMS2P54278 862 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 GJA9P57773 515 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 SMAD3P84022 425 aaKnown RBP10.52□□□□□ -0.73
VPS25-202ENST00000589219 ZNF844Q08AG5 666 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 CALCOCO2Q13137 446 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 KLF1Q13351 362 aaPredicted RBP10.52□□□□□ -0.73
VPS25-202ENST00000589219 PIGHQ14442 188 aaPredicted RBP10.52□□□□□ -0.73
VPS25-202ENST00000589219 TMEM132DQ14C87 1099 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 DGKDQ16760 1214 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 GNASQ5JWF2 1037 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 DENND2CQ68D51 928 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 IQSEC1Q6DN90 963 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 CCSAPQ6IQ19 270 aaPredicted RBP10.52□□□□□ -0.73
VPS25-202ENST00000589219 CEP128Q6ZU80 1094 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 ERICH1Q86X53 443 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 CCDC50Q8IVM0 306 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 ZDHHC14Q8IZN3 488 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 CEP120Q8N960 986 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 C1orf127Q8N9H9 656 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 BBOF1Q8ND07 529 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 CCHCR1Q8TD31 782 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms