RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 TSPAN16Q9UKR8 245 aa32.91■■■□□ 2.86
CAPNS1-206ENST00000588815 PTPRDP23468 1912 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 SYN3O14994 580 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 FGBP02675 491 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 ITGB1P05556 798 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 CALB1P05937 261 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 SETSIPP0DME0 302 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 ACRP10323 421 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 MMP8P22894 467 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 LIN9Q5TKA1 542 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 PSRC1Q6PGN9 363 aaPredicted RBP32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 SYT10Q6XYQ8 523 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 C7orf61Q8IZ16 206 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 HASPINQ8TF76 798 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 BADQ92934 168 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 ZNF653Q96CK0 615 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 ACBD6Q9BR61 282 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 ADAM22Q9P0K1 906 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 SALL4Q9UJQ4 1053 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 PAXBP1Q9Y5B6 917 aa32.9■■■□□ 2.86
CAPNS1-206ENST00000588815 CYP1A2P05177 515 aa32.89■■■□□ 2.86
CAPNS1-206ENST00000588815 NAP1L1P55209 391 aaKnown RBP32.89■■■□□ 2.86
CAPNS1-206ENST00000588815 PPP1R26Q5T8A7 1209 aaPredicted RBP32.89■■■□□ 2.86
CAPNS1-206ENST00000588815 DENND1BQ6P3S1 775 aa32.89■■■□□ 2.86
CAPNS1-206ENST00000588815 THEM5Q8N1Q8 247 aa32.89■■■□□ 2.86
CAPNS1-206ENST00000588815 C12orf29Q8N999 325 aa32.89■■■□□ 2.86
CAPNS1-206ENST00000588815 C1orf131Q8NDD1 294 aaKnown RBP32.89■■■□□ 2.86
CAPNS1-206ENST00000588815 DPEP3Q9H4B8 488 aa32.89■■■□□ 2.86
CAPNS1-206ENST00000588815 RC3H2Q9HBD1 1191 aaKnown RBP32.89■■■□□ 2.86
CAPNS1-206ENST00000588815 UVRAGQ9P2Y5 699 aa32.89■■■□□ 2.86
CAPNS1-206ENST00000588815 DNAI1Q9UI46 699 aa32.89■■■□□ 2.86
CAPNS1-206ENST00000588815 PRG3Q9Y2Y8 225 aaPredicted RBP32.89■■■□□ 2.86
CAPNS1-206ENST00000588815 PCDHGC5Q9Y5F6 944 aa32.89■■■□□ 2.86
CAPNS1-206ENST00000588815 M0QYV0 167 aa32.88■■■□□ 2.85
CAPNS1-206ENST00000588815 MTA2O94776 668 aa32.88■■■□□ 2.85
CAPNS1-206ENST00000588815 GALTP07902 379 aa32.88■■■□□ 2.85
CAPNS1-206ENST00000588815 PTPN1P18031 435 aaKnown RBP32.88■■■□□ 2.85
CAPNS1-206ENST00000588815 SLC11A1P49279 550 aa32.88■■■□□ 2.85
CAPNS1-206ENST00000588815 DNAAF5Q86Y56 855 aa32.88■■■□□ 2.85
CAPNS1-206ENST00000588815 CMTR2Q8IYT2 770 aaKnown RBP32.88■■■□□ 2.85
CAPNS1-206ENST00000588815 SLC35F6Q8N357 371 aa32.88■■■□□ 2.85
CAPNS1-206ENST00000588815 WDTC1Q8N5D0 677 aa32.88■■■□□ 2.85
CAPNS1-206ENST00000588815 SLC35G2Q8TBE7 412 aa32.88■■■□□ 2.85
CAPNS1-206ENST00000588815 SYT15Q9BQS2 421 aa32.88■■■□□ 2.85
CAPNS1-206ENST00000588815 MIS12Q9H081 205 aa32.88■■■□□ 2.85
CAPNS1-206ENST00000588815 STRIP2Q9ULQ0 834 aa32.88■■■□□ 2.85
CAPNS1-206ENST00000588815 KIAA1671Q9BY89 1806 aa32.88■■■□□ 2.85
CAPNS1-206ENST00000588815 MOCS3O95396 460 aa32.87■■■□□ 2.85
CAPNS1-206ENST00000588815 CASQ1P31415 396 aa32.87■■■□□ 2.85
CAPNS1-206ENST00000588815 GPD2P43304 727 aa32.87■■■□□ 2.85
CAPNS1-206ENST00000588815 NOP2P46087 812 aaKnown RBP32.87■■■□□ 2.85
CAPNS1-206ENST00000588815 DEFB103AP81534 67 aa32.87■■■□□ 2.85
CAPNS1-206ENST00000588815 PKDCCQ504Y2 493 aa32.87■■■□□ 2.85
CAPNS1-206ENST00000588815 OVOS1Q6IE37 1185 aa32.87■■■□□ 2.85
CAPNS1-206ENST00000588815 ERICH1Q86X53 443 aa32.87■■■□□ 2.85
CAPNS1-206ENST00000588815 HNRNPABQ99729 332 aaKnown RBP32.87■■■□□ 2.85
CAPNS1-206ENST00000588815 CNOT8Q9UFF9 292 aaKnown RBP32.87■■■□□ 2.85
CAPNS1-206ENST00000588815 SF3B1O75533 1304 aaKnown RBP eCLIP32.87■■■□□ 2.859e-10■■■■□ 24.3
CAPNS1-206ENST00000588815 SSTR3P32745 418 aaPredicted RBP32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 GOLGA7BQ2TAP0 167 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 C16orf59Q7L2K0 433 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 ANKRD52Q8NB46 1076 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 UBE2Q2Q8WVN8 375 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 WDR24Q96S15 920 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 FAM49BQ9NUQ9 324 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 TIMM13Q9Y5L4 95 aaPredicted RBP32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 NLRC5Q86WI3 1866 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 I3L4J1 428 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 BUB1O43683 1085 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 ALDH7A1P49419 539 aaKnown RBP32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 BCAT1P54687 386 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 SNX16P57768 344 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 YWHAHQ04917 246 aaPredicted RBP32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 PTP4A2Q12974 167 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 OTOP2Q7RTS6 562 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 STK32AQ8WU08 396 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 ARHGEF26Q96DR7 871 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 CWH43Q9H720 699 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 MRPL47Q9HD33 250 aaKnown RBP32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 MARCH5Q9NX47 278 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 CTTNBP2NLQ9P2B4 639 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 CAPN6Q9Y6Q1 641 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 SCINQ9Y6U3 715 aa32.86■■■□□ 2.85
CAPNS1-206ENST00000588815 OAZ2O95190 189 aa32.85■■■□□ 2.85
CAPNS1-206ENST00000588815 GSCP56915 257 aaPredicted RBP32.85■■■□□ 2.85
CAPNS1-206ENST00000588815 BCAR1P56945 870 aa32.85■■■□□ 2.85
CAPNS1-206ENST00000588815 MAPRE1Q15691 268 aaKnown RBP32.85■■■□□ 2.85
CAPNS1-206ENST00000588815 PDZRN4Q6ZMN7 1036 aaPredicted RBP32.85■■■□□ 2.85
CAPNS1-206ENST00000588815 ZNF365Q70YC5 407 aa32.85■■■□□ 2.85
CAPNS1-206ENST00000588815 SYCE1Q8N0S2 351 aa32.85■■■□□ 2.85
CAPNS1-206ENST00000588815 C11orf70Q9BRQ4 267 aa32.85■■■□□ 2.85
CAPNS1-206ENST00000588815 WDR35Q9P2L0 1181 aa32.85■■■□□ 2.85
CAPNS1-206ENST00000588815 F8W810 466 aa32.84■■■□□ 2.85
CAPNS1-206ENST00000588815 HCRTO43612 131 aa32.84■■■□□ 2.85
CAPNS1-206ENST00000588815 PLCB3Q01970 1234 aa32.84■■■□□ 2.85
CAPNS1-206ENST00000588815 BST2Q10589 180 aaKnown RBP32.84■■■□□ 2.85
CAPNS1-206ENST00000588815 MMS22LQ6ZRQ5 1243 aa32.84■■■□□ 2.85
CAPNS1-206ENST00000588815 TPCN2Q8NHX9 752 aa32.84■■■□□ 2.85
CAPNS1-206ENST00000588815 ZNF592Q92610 1267 aa32.84■■■□□ 2.85
CAPNS1-206ENST00000588815 CYLDQ9NQC7 956 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms