RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 KBTBD7Q8WVZ9 684 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 IRF7Q92985 503 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 DDX23Q9BUQ8 820 aaKnown RBP15.48■□□□□ 0.07
DDX39A-208ENST00000588692 TRMT61BQ9BVS5 477 aaKnown RBP15.48■□□□□ 0.07
DDX39A-208ENST00000588692 GZF1Q9H116 711 aaPredicted RBP15.48■□□□□ 0.07
DDX39A-208ENST00000588692 ATXN3LQ9H3M9 355 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 GDPD2Q9HCC8 539 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 CDH9Q9ULB4 789 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 TRAF3IP3Q9Y228 551 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 SIT1Q9Y3P8 196 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 DENND4CQ5VZ89 1909 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 COL4A2P08572 1712 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 OBSL1O75147 1896 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 KANSL1LA0AUZ9 987 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 CALUO43852 315 aaPredicted RBP15.47■□□□□ 0.07
DDX39A-208ENST00000588692 NR3C1P04150 777 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 PRR29P0C7W0 189 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 CSH1P0DML2 217 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 CSH2P0DML3 217 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 WARSP23381 471 aaKnown RBP15.47■□□□□ 0.07
DDX39A-208ENST00000588692 WEE1P30291 646 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 ATICP31939 592 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 CLDN10P78369 228 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 TRPC3Q13507 836 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 SNW1Q13573 536 aaKnown RBP15.47■□□□□ 0.07
DDX39A-208ENST00000588692 VITQ6UXI7 678 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 C4orf50Q6ZRC1 276 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 SPATA2LQ8IUW3 424 aaPredicted RBP15.47■□□□□ 0.07
DDX39A-208ENST00000588692 MFSD6LQ8IWD5 586 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 DTWD2Q8NBA8 298 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 PJA1Q8NG27 643 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 PARD3BQ8TEW8 1205 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 SYAP1Q96A49 352 aaPredicted RBP15.47■□□□□ 0.07
DDX39A-208ENST00000588692 MMS19Q96T76 1030 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 SYT15Q9BQS2 421 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 PI4K2AQ9BTU6 479 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 OSBPL6Q9BZF3 934 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 BRD9Q9H8M2 597 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 TRPV5Q9NQA5 729 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 GTF3C4Q9UKN8 822 aa15.47■□□□□ 0.07
DDX39A-208ENST00000588692 GOLGA6L4A6NEF3 574 aa15.46■□□□□ 0.07
DDX39A-208ENST00000588692 H0Y858 1186 aa15.46■□□□□ 0.07
DDX39A-208ENST00000588692 TACC1O75410 805 aa15.46■□□□□ 0.07
DDX39A-208ENST00000588692 CST3P01034 146 aaPredicted RBP15.46■□□□□ 0.07
DDX39A-208ENST00000588692 VIPR2P41587 438 aa15.46■□□□□ 0.07
DDX39A-208ENST00000588692 MAGEA11P43364 429 aa15.46■□□□□ 0.07
DDX39A-208ENST00000588692 TNNC1P63316 161 aa15.46■□□□□ 0.07
DDX39A-208ENST00000588692 GRM2Q14416 872 aa15.46■□□□□ 0.07
DDX39A-208ENST00000588692 GPR158Q5T848 1215 aa15.46■□□□□ 0.07
DDX39A-208ENST00000588692 FAM171BQ6P995 826 aa15.46■□□□□ 0.07
DDX39A-208ENST00000588692 GIPC2Q8TF65 315 aa15.46■□□□□ 0.07
DDX39A-208ENST00000588692 ZNF516Q92618 1163 aa15.46■□□□□ 0.07
DDX39A-208ENST00000588692 ATOH1Q92858 354 aaPredicted RBP15.46■□□□□ 0.07
DDX39A-208ENST00000588692 MKNK1Q9BUB5 465 aa15.46■□□□□ 0.07
DDX39A-208ENST00000588692 IL21Q9HBE4 155 aa15.46■□□□□ 0.07
DDX39A-208ENST00000588692 OBP2AQ9NY56 170 aa15.46■□□□□ 0.07
DDX39A-208ENST00000588692 PTPRDP23468 1912 aa15.46■□□□□ 0.07
DDX39A-208ENST00000588692 TICRRQ7Z2Z1 1910 aa15.46■□□□□ 0.07
DDX39A-208ENST00000588692 LRRIQ3A6PVS8 624 aaPredicted RBP15.46■□□□□ 0.06
DDX39A-208ENST00000588692 SOBPA7XYQ1 873 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 MAPK13O15264 365 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 PHACTR2O75167 634 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 CDR1P51861 262 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 BIRC3Q13489 604 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 NFIL3Q16649 462 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 WDR72Q3MJ13 1102 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 STXBP5Q5T5C0 1151 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 ARID3BQ8IVW6 561 aaPredicted RBP15.46■□□□□ 0.06
DDX39A-208ENST00000588692 GUF1Q8N442 669 aaKnown RBP15.46■□□□□ 0.06
DDX39A-208ENST00000588692 PLEKHO2Q8TD55 490 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 TMC2Q8TDI7 906 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 CEP295NLQ96MC4 621 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 NELL2Q99435 816 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 FOXQ1Q9C009 403 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 XYLT2Q9H1B5 865 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 SNX25Q9H3E2 840 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 TASP1Q9H6P5 420 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 VRTNQ9H8Y1 702 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 DLGAP2Q9P1A6 1054 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 UXTQ9UBK9 157 aaPredicted RBP15.46■□□□□ 0.06
DDX39A-208ENST00000588692 FRMD4BQ9Y2L6 1034 aa15.46■□□□□ 0.06
DDX39A-208ENST00000588692 MRPS17Q9Y2R5 130 aaKnown RBP15.46■□□□□ 0.06
DDX39A-208ENST00000588692 MYBPHLA2RUH7 354 aa15.45■□□□□ 0.06
DDX39A-208ENST00000588692 HEPACAM2A8MVW5 462 aa15.45■□□□□ 0.06
DDX39A-208ENST00000588692 DPYSL4O14531 572 aa15.45■□□□□ 0.06
DDX39A-208ENST00000588692 ZNF263O14978 683 aa15.45■□□□□ 0.06
DDX39A-208ENST00000588692 HMGA1P17096 107 aaKnown RBP15.45■□□□□ 0.06
DDX39A-208ENST00000588692 CYP2F1P24903 491 aa15.45■□□□□ 0.06
DDX39A-208ENST00000588692 DDX6P26196 483 aaKnown RBP eCLIP15.45■□□□□ 0.06
DDX39A-208ENST00000588692 GDI1P31150 447 aa15.45■□□□□ 0.06
DDX39A-208ENST00000588692 MAGEA9P43362 315 aa15.45■□□□□ 0.06
DDX39A-208ENST00000588692 CASP4P49662 377 aa15.45■□□□□ 0.06
DDX39A-208ENST00000588692 MRE11P49959 708 aa15.45■□□□□ 0.06
DDX39A-208ENST00000588692 MYL6P60660 151 aa15.45■□□□□ 0.06
DDX39A-208ENST00000588692 FCHO2Q0JRZ9 810 aa15.45■□□□□ 0.06
DDX39A-208ENST00000588692 TDRD10Q5VZ19 366 aaKnown RBP15.45■□□□□ 0.06
DDX39A-208ENST00000588692 VSTM1Q6UX27 236 aa15.45■□□□□ 0.06
DDX39A-208ENST00000588692 TPRG1Q6ZUI0 275 aa15.45■□□□□ 0.06
DDX39A-208ENST00000588692 YAF2Q8IY57 180 aa15.45■□□□□ 0.06
DDX39A-208ENST00000588692 TRMT2BQ96GJ1 504 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms