RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 ADGRF2Q8IZF7 708 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 IQUBQ8NA54 791 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 RDH13Q8NBN7 331 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 ZBTB44Q8NCP5 570 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 BPIFB1Q8TDL5 484 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 ANKRD36BP1Q96IX9 119 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 PKMYT1Q99640 499 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 ACBD6Q9BR61 282 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 LRRC27Q9C0I9 530 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 BLZF1Q9H2G9 400 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 CUEDC2Q9H467 287 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 ZSCAN32Q9NX65 697 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 GDAP2Q9NXN4 497 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 GTF3C4Q9UKN8 822 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 PCDHGA2Q9Y5H1 932 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 F5P12259 2224 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 SCN1AP35498 2009 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 MYBPHLA2RUH7 354 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 SPECC1L-ADORA2AF8WAN1 911 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 CLIC2O15247 247 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 TGFB1I1O43294 461 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 ATP2C2O75185 946 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 F11P03951 625 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 ZSCAN22P10073 491 aaPredicted RBP15.4■□□□□ 0.06
VMP1-206ENST00000587945 ID4P47928 161 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 MYL7Q01449 175 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 ARHGAP29Q52LW3 1261 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 FAM26FQ5R3K3 315 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 TXNDC8Q6A555 127 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 EPM2AIP1Q7L775 607 aaPredicted RBP15.4■□□□□ 0.06
VMP1-206ENST00000587945 HSCBQ8IWL3 235 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 NELFCDQ8IXH7 590 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 CMTM8Q8IZV2 173 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 TMEM86AQ8N2M4 240 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 MAB21L3Q8N8X9 362 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 SPRYD3Q8NCJ5 442 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 RUBCNQ92622 972 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 NELL1Q92832 810 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 HPDLQ96IR7 371 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 C7orf25Q9BPX7 421 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 C8orf33Q9H7E9 229 aaPredicted RBP15.4■□□□□ 0.06
VMP1-206ENST00000587945 OBP2AQ9NY56 170 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 CCL26Q9Y258 94 aa15.4■□□□□ 0.06
VMP1-206ENST00000587945 GABRDO14764 452 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 KIAA0391O15091 583 aaKnown RBP15.39■□□□□ 0.05
VMP1-206ENST00000587945 EIF3DO15371 548 aaKnown RBP eCLIP15.39■□□□□ 0.05
VMP1-206ENST00000587945 F13A1P00488 732 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 TNNC2P02585 160 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 HSP90AA1P07900 732 aaKnown RBP15.39■□□□□ 0.05
VMP1-206ENST00000587945 TDGF1P13385 188 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 LMO2P25791 158 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 WEE1P30291 646 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 CTHP32929 405 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 CYP2J2P51589 502 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 MLLT6P55198 1093 aaPredicted RBP15.39■□□□□ 0.05
VMP1-206ENST00000587945 SATB1Q01826 763 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 PKP1Q13835 747 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 DUOXA2Q1HG44 320 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 CNNM4Q6P4Q7 775 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 Q6ZS52 159 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 TOP6BLQ8N6T0 577 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 ZNF507Q8TCN5 953 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 LEO1Q8WVC0 666 aaPredicted RBP15.39■□□□□ 0.05
VMP1-206ENST00000587945 SCFD1Q8WVM8 642 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 USP13Q92995 863 aaPredicted RBP15.39■□□□□ 0.05
VMP1-206ENST00000587945 AGPAT3Q9NRZ7 376 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 GKN1Q9NS71 199 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 PCDHA7Q9UN72 937 aa15.39■□□□□ 0.05
VMP1-206ENST00000587945 R3HCC1Q9Y3T6 440 aaKnown RBP15.39■□□□□ 0.05
VMP1-206ENST00000587945 TSC2P49815 1807 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 LILRB5O75023 590 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 TADA3O75528 432 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 CSH1P0DML2 217 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 CSH2P0DML3 217 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 DLATP10515 647 aaKnown RBP15.38■□□□□ 0.05
VMP1-206ENST00000587945 PCSK1P29120 753 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 AFMP43652 599 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 ME1P48163 572 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 LHX1P48742 406 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 PSMC1P62191 440 aaKnown RBP15.38■□□□□ 0.05
VMP1-206ENST00000587945 RPL10AP62906 217 aaKnown RBP15.38■□□□□ 0.05
VMP1-206ENST00000587945 MYO1EQ12965 1108 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 PON2Q15165 354 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 TRIM68Q6AZZ1 485 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 UNC13DQ70J99 1090 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 RALGPS2Q86X27 583 aaPredicted RBP15.38■□□□□ 0.05
VMP1-206ENST00000587945 SPATA2LQ8IUW3 424 aaPredicted RBP15.38■□□□□ 0.05
VMP1-206ENST00000587945 SCN4BQ8IWT1 228 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 GRAMD1CQ8IYS0 662 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 CELF5Q8N6W0 485 aaKnown RBP15.38■□□□□ 0.05
VMP1-206ENST00000587945 RIN3Q8TB24 985 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 KBTBD7Q8WVZ9 684 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 MSANTD3Q96H12 275 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 ABCB6Q9NP58 842 aa15.38■□□□□ 0.05
VMP1-206ENST00000587945 SMG5Q9UPR3 1016 aaKnown RBP15.38■□□□□ 0.05
VMP1-206ENST00000587945 NOL4O94818 638 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 CST3P01034 146 aaPredicted RBP15.37■□□□□ 0.05
VMP1-206ENST00000587945 PDGFRBP09619 1106 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 HOXC13P31276 330 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 AVPR1AP37288 418 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms