RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 ASAH2Q9NR71 780 aa16.93■□□□□ 0.3
NCLN-203ENST00000587740 RXFP3Q9NSD7 469 aa16.93■□□□□ 0.3
NCLN-203ENST00000587740 CNTN3Q9P232 1028 aa16.93■□□□□ 0.3
NCLN-203ENST00000587740 RALYQ9UKM9 306 aaKnown RBP16.93■□□□□ 0.3
NCLN-203ENST00000587740 NUB1Q9Y5A7 615 aa16.93■□□□□ 0.3
NCLN-203ENST00000587740 STYXL1Q9Y6J8 313 aa16.93■□□□□ 0.3
NCLN-203ENST00000587740 ATG2BQ96BY7 2078 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 MYBPHLA2RUH7 354 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 TISP43B9A030 160 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 CHADO15335 359 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 KCNA4P22459 653 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 RPL9P32969 192 aaKnown RBP16.92■□□□□ 0.3
NCLN-203ENST00000587740 LRRC32Q14392 662 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 SF3A2Q15428 464 aaKnown RBP16.92■□□□□ 0.3
NCLN-203ENST00000587740 BMT2Q1RMZ1 405 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 ZNF280DQ6N043 979 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 NELFCDQ8IXH7 590 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 LEMD2Q8NC56 503 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 KIAA0895Q8NCT3 520 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 TTC8Q8TAM2 541 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 CSGALNACT1Q8TDX6 532 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 MKNK1Q9BUB5 465 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 SLITRK6Q9H5Y7 841 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 C8orf33Q9H7E9 229 aaPredicted RBP16.92■□□□□ 0.3
NCLN-203ENST00000587740 AGO2Q9UKV8 859 aaKnown RBP16.92■□□□□ 0.3
NCLN-203ENST00000587740 MAFFQ9ULX9 164 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 YIPF1Q9Y548 306 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 PCDHA5Q9Y5H7 936 aa16.92■□□□□ 0.3
NCLN-203ENST00000587740 FAM208BQ5VWN6 2430 aa16.91■□□□□ 0.3
NCLN-203ENST00000587740 A0A1W2PRU2 124 aa16.91■□□□□ 0.3
NCLN-203ENST00000587740 SPECC1L-ADORA2AF8WAN1 911 aa16.91■□□□□ 0.3
NCLN-203ENST00000587740 KIF20AO95235 890 aa16.91■□□□□ 0.3
NCLN-203ENST00000587740 CLTAP09496 248 aa16.91■□□□□ 0.3
NCLN-203ENST00000587740 GARTP22102 1010 aa16.91■□□□□ 0.3
NCLN-203ENST00000587740 HOXA6P31267 233 aa16.91■□□□□ 0.3
NCLN-203ENST00000587740 CTHP32929 405 aa16.91■□□□□ 0.3
NCLN-203ENST00000587740 MCM4P33991 863 aa16.91■□□□□ 0.3
NCLN-203ENST00000587740 KPNA1P52294 538 aaPredicted RBP16.91■□□□□ 0.3
NCLN-203ENST00000587740 CCDC6Q16204 474 aa16.91■□□□□ 0.3
NCLN-203ENST00000587740 KNOP1Q1ED39 458 aaKnown RBP16.91■□□□□ 0.3
NCLN-203ENST00000587740 SEZ6Q53EL9 994 aa16.91■□□□□ 0.3
NCLN-203ENST00000587740 ARMCX5Q6P1M9 558 aa16.91■□□□□ 0.3
NCLN-203ENST00000587740 ERCC4Q92889 916 aaPredicted RBP16.91■□□□□ 0.3
NCLN-203ENST00000587740 MSANTD3Q96H12 275 aa16.91■□□□□ 0.3
NCLN-203ENST00000587740 ZFYVE19Q96K21 471 aa16.91■□□□□ 0.3
NCLN-203ENST00000587740 GPR88Q9GZN0 384 aa16.91■□□□□ 0.3
NCLN-203ENST00000587740 GTSE1Q9NYZ3 720 aa16.91■□□□□ 0.3
NCLN-203ENST00000587740 ANGPTL2Q9UKU9 493 aa16.91■□□□□ 0.3
NCLN-203ENST00000587740 KIF26AQ9ULI4 1882 aaPredicted RBP16.9■□□□□ 0.3
NCLN-203ENST00000587740 AXIN1O15169 862 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 LDHAP00338 332 aaKnown RBP16.9■□□□□ 0.3
NCLN-203ENST00000587740 OR4Q2P0C623 313 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 CPB1P15086 417 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 ADSSP30520 456 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 HOXD13P35453 343 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 SNRPFP62306 86 aaKnown RBP16.9■□□□□ 0.3
NCLN-203ENST00000587740 CCINQ13939 588 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 SLC10A6Q3KNW5 377 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 DGKKQ5KSL6 1271 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 PKN3Q6P5Z2 889 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 GAREM2Q75VX8 874 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 CEP68Q76N32 757 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 HS2ST1Q7LGA3 356 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 WDR5BQ86VZ2 330 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 ARID3BQ8IVW6 561 aaPredicted RBP16.9■□□□□ 0.3
NCLN-203ENST00000587740 YAF2Q8IY57 180 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 APPL2Q8NEU8 664 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 SPATA20Q8TB22 786 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 DDX1Q92499 740 aaKnown RBP16.9■□□□□ 0.3
NCLN-203ENST00000587740 E2F7Q96AV8 911 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 PGLYRP2Q96PD5 576 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 GTPBP4Q9BZE4 634 aaKnown RBP16.9■□□□□ 0.3
NCLN-203ENST00000587740 RPF1Q9H9Y2 349 aaKnown RBP16.9■□□□□ 0.3
NCLN-203ENST00000587740 TUBGCP4Q9UGJ1 667 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 PCDHB8Q9UN66 801 aa16.9■□□□□ 0.3
NCLN-203ENST00000587740 ZZEF1O43149 2961 aa16.89■□□□□ 0.3
NCLN-203ENST00000587740 BAHCC1Q9P281 2608 aa16.89■□□□□ 0.29
NCLN-203ENST00000587740 KIAA0391O15091 583 aaKnown RBP16.89■□□□□ 0.29
NCLN-203ENST00000587740 FAM189A1O60320 539 aa16.89■□□□□ 0.29
NCLN-203ENST00000587740 CXCL8P10145 99 aa16.89■□□□□ 0.29
NCLN-203ENST00000587740 TNFSF9P41273 254 aa16.89■□□□□ 0.29
NCLN-203ENST00000587740 ACOT2P49753 483 aa16.89■□□□□ 0.29
NCLN-203ENST00000587740 LIMK1P53667 647 aa16.89■□□□□ 0.29
NCLN-203ENST00000587740 DUSP4Q13115 394 aa16.89■□□□□ 0.29
NCLN-203ENST00000587740 PON2Q15165 354 aa16.89■□□□□ 0.29
NCLN-203ENST00000587740 CAMK4Q16566 473 aa16.89■□□□□ 0.29
NCLN-203ENST00000587740 C1orf228Q6PIY5 440 aa16.89■□□□□ 0.29
NCLN-203ENST00000587740 RALGPS2Q86X27 583 aaPredicted RBP16.89■□□□□ 0.29
NCLN-203ENST00000587740 ARRDC1-AS1Q9H2J1 176 aa16.89■□□□□ 0.29
NCLN-203ENST00000587740 PCIF1Q9H4Z3 704 aa16.89■□□□□ 0.29
NCLN-203ENST00000587740 PLEKHA5Q9HAU0 1116 aa16.89■□□□□ 0.29
NCLN-203ENST00000587740 CGNQ9P2M7 1197 aaKnown RBP16.89■□□□□ 0.29
NCLN-203ENST00000587740 CPSF3Q9UKF6 684 aaKnown RBP16.89■□□□□ 0.29
NCLN-203ENST00000587740 TIMM13Q9Y5L4 95 aaPredicted RBP16.89■□□□□ 0.29
NCLN-203ENST00000587740 ATRXP46100 2492 aa16.89■□□□□ 0.29
NCLN-203ENST00000587740 M0QZQ0 153 aa16.88■□□□□ 0.29
NCLN-203ENST00000587740 TGFB1I1O43294 461 aa16.88■□□□□ 0.29
NCLN-203ENST00000587740 EXTL3O43909 919 aa16.88■□□□□ 0.29
NCLN-203ENST00000587740 FOXD2O60548 495 aaPredicted RBP16.88■□□□□ 0.29
NCLN-203ENST00000587740 OAZ2O95190 189 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms