RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 RPL7AP62424 266 aaKnown RBP21■□□□□ 0.95
TRIM47-204ENST00000587339 TAP1Q03518 808 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 PDCLQ13371 301 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 PPP1R26Q5T8A7 1209 aaPredicted RBP21■□□□□ 0.95
TRIM47-204ENST00000587339 DCUN1D2Q6PH85 259 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 ADGRF2Q8IZF7 708 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 TOP6BLQ8N6T0 577 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 MCEEQ96PE7 176 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 FAM49BQ9NUQ9 324 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 TMEM191CA6NGB0 347 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 FGGP02679 453 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 PDGFRBP09619 1106 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 FGFR1P11362 822 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 ZNF211Q13398 564 aaPredicted RBP21■□□□□ 0.95
TRIM47-204ENST00000587339 GOLGA7BQ2TAP0 167 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 LRRC8DQ7L1W4 858 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 ECHDC2Q86YB7 292 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 FAM126BQ8IXS8 530 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 DPEP3Q9H4B8 488 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 RGS18Q9NS28 235 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 WDR35Q9P2L0 1181 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 CACNG4Q9UBN1 327 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 IP6K2Q9UHH9 426 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 TMEM59LQ9UK28 342 aa21■□□□□ 0.95
TRIM47-204ENST00000587339 TARSL2A2RTX5 802 aaKnown RBP20.99■□□□□ 0.95
TRIM47-204ENST00000587339 PODXLO00592 558 aa20.99■□□□□ 0.95
TRIM47-204ENST00000587339 CYB561D2O14569 222 aa20.99■□□□□ 0.95
TRIM47-204ENST00000587339 CCL5P13501 91 aa20.99■□□□□ 0.95
TRIM47-204ENST00000587339 LMO2P25791 158 aa20.99■□□□□ 0.95
TRIM47-204ENST00000587339 PSMC1P62191 440 aaKnown RBP20.99■□□□□ 0.95
TRIM47-204ENST00000587339 CLUL1Q15846 466 aa20.99■□□□□ 0.95
TRIM47-204ENST00000587339 CRYBG2Q8N1P7 616 aa20.99■□□□□ 0.95
TRIM47-204ENST00000587339 NAP1L3Q99457 506 aaPredicted RBP20.99■□□□□ 0.95
TRIM47-204ENST00000587339 ST7Q9NRC1 585 aa20.99■□□□□ 0.95
TRIM47-204ENST00000587339 HESX1Q9UBX0 185 aa20.99■□□□□ 0.95
TRIM47-204ENST00000587339 TJP2Q9UDY2 1190 aa20.99■□□□□ 0.95
TRIM47-204ENST00000587339 LCMT1Q9UIC8 334 aa20.99■□□□□ 0.95
TRIM47-204ENST00000587339 RAB21Q9UL25 225 aa20.99■□□□□ 0.95
TRIM47-204ENST00000587339 OGDHLQ9ULD0 1010 aa20.99■□□□□ 0.95
TRIM47-204ENST00000587339 KRIT1O00522 736 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 POMCP01189 267 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 SELPP16109 830 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 RPL9P32969 192 aaKnown RBP20.98■□□□□ 0.95
TRIM47-204ENST00000587339 CLCN6P51797 869 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 RWDD2BP57060 319 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 BFSP2Q13515 415 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 PPP1R15BQ5SWA1 713 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 C8orf74Q6P047 294 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 LRRC1Q9BTT6 524 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 AP1M1Q9BXS5 423 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 WBP1LQ9NX94 342 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 CASTOR2A6NHX0 329 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 GOLGA8SH3BPF8 625 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 HCRTO43612 131 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 ERBB2P04626 1255 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 WARSP23381 471 aaKnown RBP20.98■□□□□ 0.95
TRIM47-204ENST00000587339 GABRB2P47870 512 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 GSCP56915 257 aaPredicted RBP20.98■□□□□ 0.95
TRIM47-204ENST00000587339 LONRF2Q1L5Z9 754 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 SLC24A5Q71RS6 500 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 ZNF598Q86UK7 904 aaKnown RBP20.98■□□□□ 0.95
TRIM47-204ENST00000587339 IPO4Q8TEX9 1081 aaKnown RBP20.98■□□□□ 0.95
TRIM47-204ENST00000587339 TNIP3Q96KP6 325 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 INPP5FQ9Y2H2 1132 aa20.98■□□□□ 0.95
TRIM47-204ENST00000587339 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.98■□□□□ 0.95
TRIM47-204ENST00000587339 CCDC151A5D8V7 595 aa20.97■□□□□ 0.95
TRIM47-204ENST00000587339 FAM163BP0C2L3 166 aa20.97■□□□□ 0.95
TRIM47-204ENST00000587339 KRT3P12035 628 aa20.97■□□□□ 0.95
TRIM47-204ENST00000587339 MAN1A1P33908 653 aa20.97■□□□□ 0.95
TRIM47-204ENST00000587339 GRIK3Q13003 919 aa20.97■□□□□ 0.95
TRIM47-204ENST00000587339 ZNF268Q14587 947 aaPredicted RBP20.97■□□□□ 0.95
TRIM47-204ENST00000587339 BRD3Q15059 726 aa20.97■□□□□ 0.95
TRIM47-204ENST00000587339 UPP1Q16831 310 aa20.97■□□□□ 0.95
TRIM47-204ENST00000587339 SEL1L2Q5TEA6 688 aa20.97■□□□□ 0.95
TRIM47-204ENST00000587339 ARHGAP17Q68EM7 881 aa20.97■□□□□ 0.95
TRIM47-204ENST00000587339 WDR93Q6P2C0 686 aa20.97■□□□□ 0.95
TRIM47-204ENST00000587339 RTN4RL1Q86UN2 441 aaPredicted RBP20.97■□□□□ 0.95
TRIM47-204ENST00000587339 XYLT1Q86Y38 959 aa20.97■□□□□ 0.95
TRIM47-204ENST00000587339 SENP8Q96LD8 212 aa20.97■□□□□ 0.95
TRIM47-204ENST00000587339 SIGLEC16A6NMB1 481 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 C9IYK1 514 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 CCDC188H7C350 402 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 EOMESO95936 686 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 PFKMP08237 780 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 PYGMP11217 842 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 IGFBP6P24592 240 aaPredicted RBP20.96■□□□□ 0.95
TRIM47-204ENST00000587339 VSNL1P62760 191 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 PKDCCQ504Y2 493 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 GLE1Q53GS7 698 aaKnown RBP20.96■□□□□ 0.95
TRIM47-204ENST00000587339 WSCD1Q658N2 575 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 MTERF4Q7Z6M4 381 aaKnown RBP20.96■□□□□ 0.95
TRIM47-204ENST00000587339 TTC30AQ86WT1 665 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 C3orf58Q8NDZ4 430 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 KRT12Q99456 494 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 PLVAPQ9BX97 442 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 FTHL17Q9BXU8 183 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 MIS12Q9H081 205 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 USTQ9Y2C2 406 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 MCM3P25205 808 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 DAB2IPQ5VWQ8 1189 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms