RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 TRIM61Q5EBN2 209 aa9.27□□□□□ -0.93
SDF2-204ENST00000587338 TXNDC8Q6A555 127 aa9.27□□□□□ -0.93
SDF2-204ENST00000587338 ARMCX6Q7L4S7 300 aa9.27□□□□□ -0.93
SDF2-204ENST00000587338 CPA6Q8N4T0 437 aa9.27□□□□□ -0.93
SDF2-204ENST00000587338 OR10T2Q8NGX3 314 aa9.27□□□□□ -0.93
SDF2-204ENST00000587338 RIN3Q8TB24 985 aa9.27□□□□□ -0.93
SDF2-204ENST00000587338 EZH1Q92800 747 aaPredicted RBP9.27□□□□□ -0.93
SDF2-204ENST00000587338 NUSAP1Q9BXS6 441 aaKnown RBP9.27□□□□□ -0.93
SDF2-204ENST00000587338 DDX19AQ9NUU7 478 aaKnown RBP9.27□□□□□ -0.93
SDF2-204ENST00000587338 TDP1Q9NUW8 608 aa9.27□□□□□ -0.93
SDF2-204ENST00000587338 TBX20Q9UMR3 447 aa9.27□□□□□ -0.93
SDF2-204ENST00000587338 UBQLN1Q9UMX0 589 aaKnown RBP9.27□□□□□ -0.93
SDF2-204ENST00000587338 KIAA1024Q9UPX6 916 aa9.27□□□□□ -0.93
SDF2-204ENST00000587338 PCNX2A6NKB5 2137 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 PPEF2O14830 753 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 JAK2O60674 1132 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 FDPSP14324 419 aaKnown RBP9.26□□□□□ -0.93
SDF2-204ENST00000587338 TYMPP19971 482 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 MUTP22033 750 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 PPP2R3AQ06190 1150 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 ST3GAL1Q11201 340 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 MTF1Q14872 753 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 FOXD4L5Q5VV16 416 aaPredicted RBP9.26□□□□□ -0.93
SDF2-204ENST00000587338 TMEM150AQ86TG1 271 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 PDZD3Q86UT5 571 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 PROSER1Q86XN7 944 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 DAW1Q8N136 415 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 STKLD1Q8NE28 680 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 MDGA1Q8NFP4 955 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 FOXD4L4Q8WXT5 416 aaPredicted RBP9.26□□□□□ -0.93
SDF2-204ENST00000587338 CD101Q93033 1021 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 DRC1Q96MC2 740 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 ECT2Q9H8V3 914 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 KIF9Q9HAQ2 790 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 DUS2Q9NX74 493 aaKnown RBP9.26□□□□□ -0.93
SDF2-204ENST00000587338 ABI2Q9NYB9 513 aaPredicted RBP9.26□□□□□ -0.93
SDF2-204ENST00000587338 HSFX1Q9UBD0 423 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 EVLQ9UI08 416 aaPredicted RBP9.26□□□□□ -0.93
SDF2-204ENST00000587338 ZMYM5Q9UJ78 669 aa9.26□□□□□ -0.93
SDF2-204ENST00000587338 ATXN2Q99700 1313 aaKnown RBP9.26□□□□□ -0.93
SDF2-204ENST00000587338 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 TTC26A0AVF1 554 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 CLDN3O15551 220 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 MAP3K13O43283 966 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 XPOTO43592 962 aaKnown RBP9.25□□□□□ -0.93
SDF2-204ENST00000587338 ZIC2O95409 532 aaPredicted RBP9.25□□□□□ -0.93
SDF2-204ENST00000587338 CFIP05156 583 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 CLTAP09496 248 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 ENGP17813 658 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 DDX6P26196 483 aaKnown RBP eCLIP9.25□□□□□ -0.93
SDF2-204ENST00000587338 RDXP35241 583 aaKnown RBP9.25□□□□□ -0.93
SDF2-204ENST00000587338 TNFSF9P41273 254 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 IFNAR2P48551 515 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 NLRP12P59046 1061 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 LILRA4P59901 499 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 NUCB2P80303 420 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 ZNF174Q15697 407 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 SOWAHCQ53LP3 525 aaPredicted RBP9.25□□□□□ -0.93
SDF2-204ENST00000587338 C2orf27AQ580R0 203 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 LPCAT2Q7L5N7 544 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 RASSF3Q86WH2 238 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 TMEFF1Q8IYR6 380 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 CHCHD4Q8N4Q1 142 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 CCDC33Q8N5R6 958 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 NSUN7Q8NE18 718 aaKnown RBP9.25□□□□□ -0.93
SDF2-204ENST00000587338 SNX29Q8TEQ0 813 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 RLN3Q8WXF3 142 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 MRPS31Q92665 395 aaKnown RBP9.25□□□□□ -0.93
SDF2-204ENST00000587338 ATP2A3Q93084 1043 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 BICD1Q96G01 975 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 SENP8Q96LD8 212 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 CNOT6LQ96LI5 555 aaKnown RBP9.25□□□□□ -0.93
SDF2-204ENST00000587338 LLPHQ9BRT6 129 aaKnown RBP9.25□□□□□ -0.93
SDF2-204ENST00000587338 RUSC1Q9BVN2 902 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 GTPBP2Q9BX10 602 aaKnown RBP9.25□□□□□ -0.93
SDF2-204ENST00000587338 PLEKHA5Q9HAU0 1116 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 TRPC7Q9HCX4 862 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 FSCN3Q9NQT6 498 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 MAGED2Q9UNF1 606 aaPredicted RBP9.25□□□□□ -0.93
SDF2-204ENST00000587338 GPSM3Q9Y4H4 160 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.25□□□□□ -0.93
SDF2-204ENST00000587338 WNT6Q9Y6F9 365 aa9.25□□□□□ -0.93
SDF2-204ENST00000587338 VPS37CA5D8V6 355 aaPredicted RBP9.24□□□□□ -0.93
SDF2-204ENST00000587338 SFI1A8K8P3 1242 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 LACTBL1A8MY62 500 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 E9PMD0 336 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 H0Y626 953 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 H3BQV1 296 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 TRIM16O95361 564 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 F11P03951 625 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 HAPLN1P10915 354 aaPredicted RBP9.24□□□□□ -0.93
SDF2-204ENST00000587338 CYP3A5P20815 502 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 PTGER3P43115 390 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 ATXN3P54252 364 aaPredicted RBP9.24□□□□□ -0.93
SDF2-204ENST00000587338 HMGN5P82970 282 aaKnown RBP9.24□□□□□ -0.93
SDF2-204ENST00000587338 MCL1Q07820 350 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 RAD51AP2Q09MP3 1159 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 MAPK7Q13164 816 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 ZNF268Q14587 947 aaPredicted RBP9.24□□□□□ -0.93
SDF2-204ENST00000587338 ZBTB6Q15916 424 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms