RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 DLL3Q9NYJ7 618 aa16.36■□□□□ 0.21
PRKCSH-204ENST00000587290 HSFX1Q9UBD0 423 aa16.36■□□□□ 0.21
PRKCSH-204ENST00000587290 OTOL1A6NHN0 477 aaPredicted RBP16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 K7ESF4 209 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 PRPF40AO75400 957 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 TADA3O75528 432 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 KRT19P08727 400 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 TGM1P22735 817 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 PAX3P23760 479 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 CYP2F1P24903 491 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 NLRP12P59046 1061 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 SPEM2Q0P670 501 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 PUM1Q14671 1186 aaKnown RBP eCLIP16.35■□□□□ 0.211e-6■■□□□ 12
PRKCSH-204ENST00000587290 POSTNQ15063 836 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 DDR2Q16832 855 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 NAIF1Q69YI7 327 aaPredicted RBP16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 TXNDC8Q6A555 127 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 CMTM8Q8IZV2 173 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 USP13Q92995 863 aaPredicted RBP16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 CHFRQ96EP1 664 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 FAM126AQ9BYI3 521 aaPredicted RBP16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 C8orf33Q9H7E9 229 aaPredicted RBP16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 HPS4Q9NQG7 708 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 OLFML3Q9NRN5 406 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 GKN1Q9NS71 199 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 POLR3BQ9NW08 1133 aaPredicted RBP16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 DDX43Q9NXZ2 648 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 SIX4Q9UIU6 781 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 EXOC7Q9UPT5 735 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 PCDHB5Q9Y5E4 795 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 KIAA1549LQ6ZVL6 1849 aa16.35■□□□□ 0.21
PRKCSH-204ENST00000587290 FRMD3A2A2Y4 597 aa16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 HRO43593 1189 aa16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 FGF19O95750 216 aa16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 F11P03951 625 aa16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 ARSAP15289 507 aa16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 TSPY1Q01534 308 aa16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 CCINQ13939 588 aa16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 LRRC32Q14392 662 aa16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 CCDC73Q6ZRK6 1079 aa16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 RALGPS2Q86X27 583 aaPredicted RBP16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 DCP1BQ8IZD4 617 aaKnown RBP16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 SPEM1Q8N4L4 309 aa16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 CSGALNACT2Q8N6G5 542 aa16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 C2orf15Q8WU43 125 aaKnown RBP16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 IER2Q9BTL4 223 aa16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 EBF3Q9H4W6 596 aa16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 OBP2AQ9NY56 170 aa16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 GTF3C4Q9UKN8 822 aa16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 SNX9Q9Y5X1 595 aa16.34■□□□□ 0.21
PRKCSH-204ENST00000587290 EXTL3O43909 919 aa16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 HUS1O60921 280 aa16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 ATP2C2O75185 946 aa16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 GARTP22102 1010 aa16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 PXNP49023 591 aaPredicted RBP16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 NRLP54845 237 aa16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 MLLT6P55198 1093 aaPredicted RBP16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 SLC39A14Q15043 492 aa16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 INTS6LQ5JSJ4 861 aaKnown RBP16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 FOXD4L5Q5VV16 416 aaPredicted RBP16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 MAMSTRQ6ZN01 415 aa16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 NT5DC4Q86YG4 428 aa16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 CBWD2Q8IUF1 395 aa16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 CELF5Q8N6W0 485 aaKnown RBP16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 OR5B17Q8NGF7 314 aa16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 FOXD4L4Q8WXT5 416 aaPredicted RBP16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 SECISBP2LQ93073 1101 aaKnown RBP16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 MSANTD3Q96H12 275 aa16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 PKMYT1Q99640 499 aa16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 GMEB2Q9UKD1 530 aa16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 PCDHB13Q9Y5F0 798 aa16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.33■□□□□ 0.2
PRKCSH-204ENST00000587290 TMEM191BP0C7N4 346 aa16.32■□□□□ 0.2
PRKCSH-204ENST00000587290 HOXD13P35453 343 aa16.32■□□□□ 0.2
PRKCSH-204ENST00000587290 AVPR1AP37288 418 aa16.32■□□□□ 0.2
PRKCSH-204ENST00000587290 PNPLA4P41247 253 aa16.32■□□□□ 0.2
PRKCSH-204ENST00000587290 PSMC1P62191 440 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-204ENST00000587290 POU5F1Q01860 360 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-204ENST00000587290 SIM2Q14190 667 aaPredicted RBP16.32■□□□□ 0.2
PRKCSH-204ENST00000587290 PPP2R5DQ14738 602 aa16.32■□□□□ 0.2
PRKCSH-204ENST00000587290 ITPRIPL2Q3MIP1 535 aa16.32■□□□□ 0.2
PRKCSH-204ENST00000587290 ADGRF2Q8IZF7 708 aa16.32■□□□□ 0.2
PRKCSH-204ENST00000587290 SLC22A12Q96S37 553 aa16.32■□□□□ 0.2
PRKCSH-204ENST00000587290 FAM83CQ9BQN1 747 aa16.32■□□□□ 0.2
PRKCSH-204ENST00000587290 TRPC7Q9HCX4 862 aa16.32■□□□□ 0.2
PRKCSH-204ENST00000587290 TFIP11Q9UBB9 837 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-204ENST00000587290 ITGA11Q9UKX5 1188 aa16.32■□□□□ 0.2
PRKCSH-204ENST00000587290 RAB23Q9ULC3 237 aa16.32■□□□□ 0.2
PRKCSH-204ENST00000587290 DCDC2BA2VCK2 349 aa16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 CASP1P29466 404 aa16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 WEE1P30291 646 aa16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 ATXN1P54253 815 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 PLCB2Q00722 1185 aa16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 SMARCB1Q12824 385 aa16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 STK38Q15208 465 aa16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 NFE2Q16621 373 aaPredicted RBP16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 SOWAHAQ2M3V2 549 aa16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 DGKKQ5KSL6 1271 aa16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 FSTL4Q6MZW2 842 aa16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 SCN4BQ8IWT1 228 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms