RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 PARP2Q9UGN5 583 aa19.66■□□□□ 0.74
RETREG3-205ENST00000586870 DCAF4L1Q3SXM0 396 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 TMEM270Q6UE05 265 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 MRPL10Q7Z7H8 261 aaKnown RBP19.65■□□□□ 0.74
RETREG3-205ENST00000586870 ZNF564Q8TBZ8 553 aaPredicted RBP19.65■□□□□ 0.74
RETREG3-205ENST00000586870 SP7Q8TDD2 431 aaPredicted RBP19.65■□□□□ 0.74
RETREG3-205ENST00000586870 HDAC7Q8WUI4 952 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 ARNTL2Q8WYA1 636 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 NUP85Q9BW27 656 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 CNOT8Q9UFF9 292 aaKnown RBP19.65■□□□□ 0.74
RETREG3-205ENST00000586870 INPP5FQ9Y2H2 1132 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 HES2Q9Y543 173 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 RNASE9P60153 205 aaKnown RBP19.65■□□□□ 0.74
RETREG3-205ENST00000586870 MYL6P60660 151 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 TFAMQ00059 246 aaKnown RBP19.65■□□□□ 0.74
RETREG3-205ENST00000586870 CENPCQ03188 943 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 CASP8Q14790 479 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 IFT20Q8IY31 132 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 MCOLN2Q8IZK6 566 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 UBL4BQ8N7F7 174 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 SMG8Q8ND04 991 aaKnown RBP19.65■□□□□ 0.74
RETREG3-205ENST00000586870 URGCPQ8TCY9 931 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 KRT12Q99456 494 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 NAP1L3Q99457 506 aaPredicted RBP19.65■□□□□ 0.74
RETREG3-205ENST00000586870 UBXN6Q9BZV1 441 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 NIF3L1Q9GZT8 377 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 TTYH1Q9H313 450 aaPredicted RBP19.65■□□□□ 0.74
RETREG3-205ENST00000586870 RSAD1Q9HA92 442 aa19.65■□□□□ 0.74
RETREG3-205ENST00000586870 SZT2Q5T011 3432 aa19.64■□□□□ 0.74
RETREG3-205ENST00000586870 ZMYND10O75800 440 aa19.64■□□□□ 0.73
RETREG3-205ENST00000586870 CLSTN1O94985 981 aa19.64■□□□□ 0.73
RETREG3-205ENST00000586870 ATF7P17544 494 aaPredicted RBP19.64■□□□□ 0.73
RETREG3-205ENST00000586870 GNA15P30679 374 aa19.64■□□□□ 0.73
RETREG3-205ENST00000586870 ZNF132P52740 706 aa19.64■□□□□ 0.73
RETREG3-205ENST00000586870 RNASELQ05823 741 aaKnown RBP19.64■□□□□ 0.73
RETREG3-205ENST00000586870 GPS2Q13227 327 aa19.64■□□□□ 0.73
RETREG3-205ENST00000586870 MESDQ14696 234 aa19.64■□□□□ 0.73
RETREG3-205ENST00000586870 EFCAB13Q8IY85 973 aa19.64■□□□□ 0.73
RETREG3-205ENST00000586870 FAXDC2Q96IV6 333 aa19.64■□□□□ 0.73
RETREG3-205ENST00000586870 SAMD11Q96NU1 681 aa19.64■□□□□ 0.73
RETREG3-205ENST00000586870 MRPL9Q9BYD2 267 aaKnown RBP19.64■□□□□ 0.73
RETREG3-205ENST00000586870 ACBD3Q9H3P7 528 aa19.64■□□□□ 0.73
RETREG3-205ENST00000586870 NXF3Q9H4D5 531 aaKnown RBP19.64■□□□□ 0.73
RETREG3-205ENST00000586870 VIPAS39Q9H9C1 493 aa19.64■□□□□ 0.73
RETREG3-205ENST00000586870 AAASQ9NRG9 546 aa19.64■□□□□ 0.73
RETREG3-205ENST00000586870 RWDD3Q9Y3V2 267 aa19.64■□□□□ 0.73
RETREG3-205ENST00000586870 LAMA3Q16787 3333 aa19.64■□□□□ 0.73
RETREG3-205ENST00000586870 MICAL3Q7RTP6 2002 aa19.63■□□□□ 0.73
RETREG3-205ENST00000586870 NSFP46459 744 aaKnown RBP19.63■□□□□ 0.73
RETREG3-205ENST00000586870 OSTNP61366 133 aa19.63■□□□□ 0.73
RETREG3-205ENST00000586870 YWHAEP62258 255 aaKnown RBP19.63■□□□□ 0.73
RETREG3-205ENST00000586870 SLC7A5Q01650 507 aa19.63■□□□□ 0.73
RETREG3-205ENST00000586870 CLLU1OSQ5K130 101 aa19.63■□□□□ 0.73
RETREG3-205ENST00000586870 CEP120Q8N960 986 aa19.63■□□□□ 0.73
RETREG3-205ENST00000586870 AENQ8WTP8 325 aaKnown RBP19.63■□□□□ 0.73
RETREG3-205ENST00000586870 RSPH1Q8WYR4 309 aa19.63■□□□□ 0.73
RETREG3-205ENST00000586870 VCPIP1Q96JH7 1222 aa19.63■□□□□ 0.73
RETREG3-205ENST00000586870 CASD1Q96PB1 797 aa19.63■□□□□ 0.73
RETREG3-205ENST00000586870 ASB7Q9H672 318 aa19.63■□□□□ 0.73
RETREG3-205ENST00000586870 GDF3Q9NR23 364 aa19.63■□□□□ 0.73
RETREG3-205ENST00000586870 FAM170AA1A519 330 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 MEIS3P2A8K0S8 358 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 KRIT1O00522 736 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 ATMINO43313 823 aaPredicted RBP19.62■□□□□ 0.73
RETREG3-205ENST00000586870 ARHGEF15O94989 841 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 CALCAP01258 141 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 COMTP21964 271 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 AKAP5P24588 427 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 CTNNA2P26232 953 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 CTNNB1P35222 781 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 ERVK-21P61565 698 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 SMC1AQ14683 1233 aaKnown RBP19.62■□□□□ 0.73
RETREG3-205ENST00000586870 GRIN2CQ14957 1233 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 PPP2R5EQ16537 467 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 NOMO2Q5JPE7 1267 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 AGMOQ6ZNB7 445 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 TMEM192Q8IY95 271 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 LRRC43Q8N309 656 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 FAM193BQ96PV7 902 aaPredicted RBP19.62■□□□□ 0.73
RETREG3-205ENST00000586870 ZSWIM1Q9BR11 485 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 C17orf80Q9BSJ5 609 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 RNF39Q9H2S5 420 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 RC3H2Q9HBD1 1191 aaKnown RBP19.62■□□□□ 0.73
RETREG3-205ENST00000586870 KANSL3Q9P2N6 904 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 GIT1Q9Y2X7 761 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 MRPL42Q9Y6G3 142 aaKnown RBP19.62■□□□□ 0.73
RETREG3-205ENST00000586870 TMEM110-MUSTN1A8MSY1 372 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 CXCL8P10145 99 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 YARSP54577 528 aaKnown RBP19.62■□□□□ 0.73
RETREG3-205ENST00000586870 ZNF699Q32M78 642 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 LIN9Q5TKA1 542 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 NAA35Q5VZE5 725 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 PHF13Q86YI8 300 aaPredicted RBP19.62■□□□□ 0.73
RETREG3-205ENST00000586870 KLHL7Q8IXQ5 586 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 FBXO22Q8NEZ5 403 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 CD101Q93033 1021 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 CYFIP2Q96F07 1278 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 PRDM12Q9H4Q4 367 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 SLITRK6Q9H5Y7 841 aa19.62■□□□□ 0.73
RETREG3-205ENST00000586870 RNF19AQ9NV58 838 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms